Protein–RNA interactions for Protein: Q96F44

TRIM11, E3 ubiquitin-protein ligase TRIM11, humanhuman

Predictions only

Length 468 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11Q96F44 MTDHP5-201ENST00000598980 586 ntBASIC17■□□□□ 0.31
TRIM11Q96F44 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC17■□□□□ 0.31
TRIM11Q96F44 ANKRD26P3-201ENST00000454044 2748 ntBASIC17■□□□□ 0.31
TRIM11Q96F44 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17■□□□□ 0.31
TRIM11Q96F44 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC17■□□□□ 0.31
TRIM11Q96F44 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 DPP6-203ENST00000404039 4798 ntTSL 1 (best) BASIC17■□□□□ 0.31
TRIM11Q96F44 PPP1R16B-202ENST00000373331 6106 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AC020658.6-201ENST00000623564 1870 ntBASIC16.99■□□□□ 0.31
TRIM11Q96F44 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AC067930.6-201ENST00000623257 4947 ntBASIC16.99■□□□□ 0.31
TRIM11Q96F44 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.99■□□□□ 0.31
TRIM11Q96F44 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AC026979.3-201ENST00000607315 403 ntBASIC16.99■□□□□ 0.31
TRIM11Q96F44 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 SLC25A36-203ENST00000446041 4638 ntAPPRIS P3 TSL 2 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
TRIM11Q96F44 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.99■□□□□ 0.31
TRIM11Q96F44 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 AC126177.1-201ENST00000547829 2218 ntBASIC16.98■□□□□ 0.31
TRIM11Q96F44 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 NSL1-203ENST00000366978 1344 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 TIMM8BP1-201ENST00000452384 211 ntBASIC16.98■□□□□ 0.31
TRIM11Q96F44 KRT8P48-201ENST00000515599 1220 ntBASIC16.98■□□□□ 0.31
TRIM11Q96F44 PGAM5P1-201ENST00000518923 814 ntBASIC16.98■□□□□ 0.31
TRIM11Q96F44 LINC01225-203ENST00000563550 1244 ntBASIC16.98■□□□□ 0.31
TRIM11Q96F44 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 HCFC1-201ENST00000310441 8869 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC16.98■□□□□ 0.31
TRIM11Q96F44 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
TRIM11Q96F44 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
TRIM11Q96F44 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.97■□□□□ 0.31
TRIM11Q96F44 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.97■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms