Protein–RNA interactions for Protein: Q92544

TM9SF4, Transmembrane 9 superfamily member 4, humanhuman

Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4Q92544 NQO2-201ENST00000338130 1515 ntAPPRIS P1 TSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC15.22■□□□□ 0.03
TM9SF4Q92544 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC15.22■□□□□ 0.03
TM9SF4Q92544 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 ORMDL1-203ENST00000392350 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 BLK-205ENST00000529894 2017 ntTSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 AMT-206ENST00000458307 1860 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 CRB3P1-201ENST00000449338 276 ntBASIC15.21■□□□□ 0.03
TM9SF4Q92544 GAPDHP21-201ENST00000450301 1010 ntBASIC15.21■□□□□ 0.03
TM9SF4Q92544 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.21■□□□□ 0.03
TM9SF4Q92544 AL590560.3-201ENST00000623350 461 ntBASIC15.21■□□□□ 0.03
TM9SF4Q92544 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.21■□□□□ 0.03
TM9SF4Q92544 TIMM44-201ENST00000270538 2075 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
TM9SF4Q92544 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF4Q92544 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF4Q92544 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF4Q92544 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
TM9SF4Q92544 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 ME2P1-201ENST00000426028 1970 ntBASIC15.2■□□□□ 0.02
TM9SF4Q92544 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 AC022144.1-201ENST00000602255 1580 ntBASIC15.2■□□□□ 0.02
TM9SF4Q92544 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 AC005052.1-201ENST00000625181 2492 ntBASIC15.2■□□□□ 0.02
TM9SF4Q92544 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 GK-202ENST00000378941 458 ntTSL 3 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 PUDP-206ENST00000540122 825 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 RPS15-212ENST00000593052 629 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 ADORA1-203ENST00000367235 2219 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
TM9SF4Q92544 CD1E-213ENST00000444681 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
TM9SF4Q92544 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
TM9SF4Q92544 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms