Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
ATG4AQ8WYN0 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 C15orf62-201ENST00000344320 2370 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AL109954.1-202ENST00000564051 2148 ntBASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 DPM3-203ENST00000368400 409 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 TNFSF13-208ENST00000483039 959 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AP002472.1-201ENST00000577490 586 ntBASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AC099522.2-201ENST00000607001 744 ntBASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 RBM12-201ENST00000359646 5332 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 TMBIM7P-203ENST00000641617 1718 ntBASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 NLRX1-202ENST00000409109 4092 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AC087481.3-201ENST00000602886 1894 ntBASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 TEN1-CDK3-202ENST00000569284 3287 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 AP001282.1-201ENST00000531301 1499 ntBASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
ATG4AQ8WYN0 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 CORO6-201ENST00000345068 2603 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 AC090616.6-203ENST00000579186 1945 ntBASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 AC105250.1-201ENST00000509378 2057 ntBASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 FAM192A-201ENST00000309137 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 ADGRA1-203ENST00000607359 6004 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 BSCL2-210ENST00000421906 1440 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 PDPK2P-202ENST00000562415 1191 ntBASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
ATG4AQ8WYN0 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 28.6 ms