Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 CA10-203ENST00000451037 3189 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 CICP24-201ENST00000605464 2705 ntBASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 FABP1-202ENST00000393750 1839 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 BRSK2-204ENST00000526678 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 KIF13B-206ENST00000524189 8745 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 MECR-201ENST00000263702 1353 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC44A1Q8WWI5 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 PROSER1-211ENST00000625998 5102 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 CD63-210ENST00000550776 870 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 WDR88-203ENST00000592765 651 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 BCL2L12-206ENST00000598306 510 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 AC023141.13-201ENST00000604991 943 ntBASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 PRKN-208ENST00000610470 531 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 PRKN-209ENST00000612485 225 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 NCOA1-205ENST00000406961 7289 ntAPPRIS P4 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC44A1Q8WWI5 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 AC091951.1-201ENST00000512854 2465 ntBASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 CSF3-203ENST00000394148 622 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC44A1Q8WWI5 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.1■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms