Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 AC100756.1-201ENST00000562736 682 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AC138749.3-201ENST00000567691 622 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 AC116165.1-201ENST00000611806 668 ntBASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 GSKIP-201ENST00000438650 2140 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHKBP1Q8TBC3 CDH15-201ENST00000289746 2847 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 PRSS48-202ENST00000455694 989 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 AL365330.1-201ENST00000607459 531 ntBASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 PKD1P1-201ENST00000458669 6805 ntBASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 TUBB6-211ENST00000591208 1492 ntTSL 5 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 CYP4F24P-201ENST00000586049 1580 ntBASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHKBP1Q8TBC3 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SHKBP1Q8TBC3 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHKBP1Q8TBC3 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
SHKBP1Q8TBC3 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 HIST3H2BA-201ENST00000436555 524 ntBASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 RN7SL752P-201ENST00000463779 287 ntBASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 GIMAP3P-201ENST00000495150 836 ntBASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC16.83■□□□□ 0.28
SHKBP1Q8TBC3 BANP-201ENST00000286122 2368 ntTSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SHKBP1Q8TBC3 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms