Protein–RNA interactions for Protein: Q8NFH3

NUP43, Nucleoporin Nup43, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP43Q8NFH3 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.05■□□□□ 0
NUP43Q8NFH3 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 FBN1-205ENST00000560355 4109 ntTSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.05■□□□□ 0
NUP43Q8NFH3 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NUP43Q8NFH3 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.05■□□□□ -0
NUP43Q8NFH3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC15.05■□□□□ -0
NUP43Q8NFH3 AC005237.2-201ENST00000434368 219 ntBASIC15.05■□□□□ -0
NUP43Q8NFH3 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.05■□□□□ -0
NUP43Q8NFH3 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC15.05■□□□□ -0
NUP43Q8NFH3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC15.05■□□□□ -0
NUP43Q8NFH3 AC010327.4-202ENST00000591484 748 ntBASIC15.05■□□□□ -0
NUP43Q8NFH3 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC15.05■□□□□ -0
NUP43Q8NFH3 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.05■□□□□ -0
NUP43Q8NFH3 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC15.05■□□□□ -0
NUP43Q8NFH3 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 AL691432.1-201ENST00000596308 1422 ntBASIC15.05■□□□□ -0
NUP43Q8NFH3 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
NUP43Q8NFH3 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 AP3S2-216ENST00000617003 1561 ntBASIC15.05■□□□□ -0
NUP43Q8NFH3 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC15.05■□□□□ -0
NUP43Q8NFH3 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.05■□□□□ -0
NUP43Q8NFH3 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC15.05■□□□□ -0
NUP43Q8NFH3 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
NUP43Q8NFH3 TNN-201ENST00000239462 5008 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
NUP43Q8NFH3 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
NUP43Q8NFH3 AC063926.3-201ENST00000624734 5658 ntBASIC15.04■□□□□ -0
NUP43Q8NFH3 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
NUP43Q8NFH3 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 COA5-202ENST00000409997 557 ntTSL 4 BASIC15.04■□□□□ -0
NUP43Q8NFH3 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC15.04■□□□□ -0
NUP43Q8NFH3 BX842568.4-201ENST00000421222 227 ntBASIC15.04■□□□□ -0
NUP43Q8NFH3 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 AC112482.1-201ENST00000492080 688 ntBASIC15.04■□□□□ -0
NUP43Q8NFH3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC15.04■□□□□ -0
NUP43Q8NFH3 YBX1P5-201ENST00000509441 847 ntBASIC15.04■□□□□ -0
NUP43Q8NFH3 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.04■□□□□ -0
NUP43Q8NFH3 CCND1-203ENST00000536559 553 ntTSL 3 BASIC15.04■□□□□ -0
NUP43Q8NFH3 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC15.04■□□□□ -0
NUP43Q8NFH3 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC15.04■□□□□ -0
NUP43Q8NFH3 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC15.04■□□□□ -0
NUP43Q8NFH3 AC084121.4-201ENST00000641598 221 ntBASIC15.04■□□□□ -0
NUP43Q8NFH3 AF228730.8-201ENST00000642140 221 ntBASIC15.04■□□□□ -0
NUP43Q8NFH3 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC15.04■□□□□ -0
NUP43Q8NFH3 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC15.04■□□□□ -0
NUP43Q8NFH3 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
NUP43Q8NFH3 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.03■□□□□ -0
NUP43Q8NFH3 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.03■□□□□ -0
NUP43Q8NFH3 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms