Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
SIMC1Q8NDZ2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 STK24-203ENST00000397517 4578 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 PTMS-202ENST00000389462 773 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 AC005020.2-201ENST00000455905 830 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 SPTSSB-204ENST00000617024 1292 ntBASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 ATP11A-AS1-201ENST00000446442 2192 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 AC144831.1-201ENST00000573312 2656 ntBASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
SIMC1Q8NDZ2 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 MAPK15-202ENST00000395107 834 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 RPS8P6-201ENST00000426177 609 ntBASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 IGHV3-62-201ENST00000520057 340 ntBASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 AP002449.1-201ENST00000588211 474 ntTSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 AL596442.2-201ENST00000610240 980 ntBASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 FBXO21-208ENST00000622495 6040 ntAPPRIS ALT1 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.18■□□□□ 0.02
SIMC1Q8NDZ2 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms