Protein–RNA interactions for Protein: Q8N5M4

TTC9C, Tetratricopeptide repeat protein 9C, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC9CQ8N5M4 AP001282.1-201ENST00000531301 1499 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AC061975.2-201ENST00000581722 295 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 SNAP47-213ENST00000617596 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 HOTTIP_1.1-201ENST00000620415 57 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AC084121.4-201ENST00000641598 221 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AF228730.8-201ENST00000642140 221 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 AC010491.1-201ENST00000563101 2797 ntBASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
TTC9CQ8N5M4 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 PLAA-205ENST00000520884 2041 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 SHISA5-219ENST00000612611 1677 ntTSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 LINC02381-201ENST00000508564 1369 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 KANK2-201ENST00000586659 5162 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AL592309.1-201ENST00000443127 649 ntBASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 ALG1L5P-201ENST00000482043 771 ntBASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 PAM16-215ENST00000577031 548 ntTSL 4 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 MIR3687-2-201ENST00000577708 61 ntBASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 MIR3687-1-201ENST00000614492 61 ntBASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 GMIP-204ENST00000587238 2987 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
TTC9CQ8N5M4 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 AC007950.2-201ENST00000615045 2347 ntBASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
TTC9CQ8N5M4 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC12.73□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 49.9 ms