Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 DOC2GP-204ENST00000639052 2548 ntBASIC16.34■□□□□ 0.21
CHPFQ8IZ52 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 GIMAP3P-201ENST00000495150 836 ntBASIC16.34■□□□□ 0.21
CHPFQ8IZ52 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 WASH4P-201ENST00000564273 1246 ntBASIC16.34■□□□□ 0.21
CHPFQ8IZ52 ARL16-202ENST00000570561 768 ntTSL 2 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 AL359881.2-201ENST00000602973 570 ntBASIC16.34■□□□□ 0.21
CHPFQ8IZ52 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 USP4-201ENST00000265560 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 CLIC5-202ENST00000339561 2390 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.34■□□□□ 0.21
CHPFQ8IZ52 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.33■□□□□ 0.21
CHPFQ8IZ52 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHPFQ8IZ52 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CHPFQ8IZ52 ALOX15B-205ENST00000573359 1809 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
CHPFQ8IZ52 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHPFQ8IZ52 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
CHPFQ8IZ52 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
CHPFQ8IZ52 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 NTMT1-201ENST00000372480 852 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AL512384.1-201ENST00000406683 331 ntBASIC16.33■□□□□ 0.2
CHPFQ8IZ52 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC023310.3-201ENST00000557027 670 ntBASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC100756.1-201ENST00000562736 682 ntBASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC138749.3-201ENST00000567691 622 ntBASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC007216.4-201ENST00000574364 562 ntTSL 4 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 AC116165.1-201ENST00000611806 668 ntBASIC16.33■□□□□ 0.2
CHPFQ8IZ52 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 THOC5-202ENST00000397871 2560 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 ZNF133-204ENST00000396026 2717 ntAPPRIS P3 TSL 3 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CHPFQ8IZ52 CICP6-201ENST00000457191 2729 ntBASIC16.32■□□□□ 0.2
CHPFQ8IZ52 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CHPFQ8IZ52 FO393414.2-201ENST00000405153 598 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms