Protein–RNA interactions for Protein: Q8IYA6

CKAP2L, Cytoskeleton-associated protein 2-like, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2LQ8IYA6 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 TMPRSS4-201ENST00000437212 2074 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 ISLR-201ENST00000249842 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 FAM24B-201ENST00000368896 704 ntAPPRIS P1 TSL 2 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 TSEN15P1-201ENST00000423257 515 ntBASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 PON3-203ENST00000427422 894 ntTSL 3 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 AL592309.1-201ENST00000443127 649 ntBASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 AC079140.1-201ENST00000508039 487 ntBASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 AC027796.2-201ENST00000575326 344 ntBASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 CRYZL1-202ENST00000361534 2224 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 AMT-233ENST00000636522 1620 ntTSL 2 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 AKAP8P1-201ENST00000434743 1349 ntBASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 CRAMP1-201ENST00000293925 7671 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CKAP2LQ8IYA6 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 GOLGA6L17P-202ENST00000614358 1398 ntBASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 AC004449.1-201ENST00000564240 433 ntBASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 AC244153.1-202ENST00000617855 482 ntTSL 3 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
CKAP2LQ8IYA6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 STC2-201ENST00000265087 5353 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 IGHV3-62-201ENST00000520057 340 ntBASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 AC243562.1-201ENST00000560672 389 ntBASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 AC069224.1-201ENST00000566372 1715 ntBASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 SIT1-204ENST00000618781 1317 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 GNRHR2-201ENST00000312753 1599 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CKAP2LQ8IYA6 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC18.67■□□□□ 0.58
CKAP2LQ8IYA6 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2LQ8IYA6 ATG9A-205ENST00000409618 4025 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CKAP2LQ8IYA6 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CKAP2LQ8IYA6 WASH6P-202ENST00000359512 1437 ntBASIC18.67■□□□□ 0.58
CKAP2LQ8IYA6 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms