Protein–RNA interactions for Protein: Q8IWT1

SCN4B, Sodium channel subunit beta-4, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4BQ8IWT1 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 BNIP3P1-202ENST00000550043 1585 ntBASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 FO393414.2-201ENST00000405153 598 ntBASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 CRB3P1-201ENST00000449338 276 ntBASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PTK7-212ENST00000476760 902 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 CNOT8-210ENST00000519404 945 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 CNOT8-214ENST00000520671 923 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 CNOT8-218ENST00000521583 1151 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 AC004461.2-201ENST00000629517 803 ntBASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 AC007541.1-201ENST00000570282 1469 ntBASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 SMIM5-201ENST00000375215 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SCN4BQ8IWT1 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 SLC39A1-202ENST00000356205 2084 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 WAC-202ENST00000347934 2839 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 KRT8P37-201ENST00000451609 1420 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 AC134407.2-201ENST00000625089 1978 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 SPDYE19P-201ENST00000338590 713 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 EFNA4-201ENST00000359751 1096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 RASL12-203ENST00000434605 982 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 HIST3H2BA-201ENST00000436555 524 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 RNASEH1-AS1-202ENST00000438436 1218 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 AL132655.2-201ENST00000596276 594 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 AF228730.6-201ENST00000641497 218 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 AC084121.3-201ENST00000641716 218 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 AC105233.6-201ENST00000642093 218 ntBASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 TRIM17-205ENST00000456946 1731 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
SCN4BQ8IWT1 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.3
SCN4BQ8IWT1 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC16.89■□□□□ 0.3
SCN4BQ8IWT1 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SCN4BQ8IWT1 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
SCN4BQ8IWT1 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
SCN4BQ8IWT1 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.89■□□□□ 0.3
SCN4BQ8IWT1 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
SCN4BQ8IWT1 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 46.1 ms