Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 TIGD4-201ENST00000304337 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 IFRD1-205ENST00000429071 1938 ntTSL 2 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 KRT8P47-201ENST00000604727 1398 ntBASIC16.27■□□□□ 0.2
PACS2Q86VP3 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 PLEKHO2-201ENST00000323544 3720 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 DSN1-207ENST00000448110 2129 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 MIR5100-201ENST00000579544 119 ntBASIC16.27■□□□□ 0.2
PACS2Q86VP3 IFNL4P1-201ENST00000607083 540 ntBASIC16.27■□□□□ 0.2
PACS2Q86VP3 IRF5-214ENST00000613821 595 ntTSL 5 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 AC092723.2-201ENST00000624955 793 ntBASIC16.27■□□□□ 0.2
PACS2Q86VP3 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 GPI-205ENST00000586425 1799 ntTSL 5 BASIC16.27■□□□□ 0.2
PACS2Q86VP3 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 ITPK1-207ENST00000555495 3035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 RNF216-202ENST00000389902 3293 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
PACS2Q86VP3 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
PACS2Q86VP3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.27■□□□□ 0.19
PACS2Q86VP3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
PACS2Q86VP3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
PACS2Q86VP3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PACS2Q86VP3 LBH-201ENST00000395323 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
PACS2Q86VP3 AL928921.2-201ENST00000641325 2442 ntBASIC16.27■□□□□ 0.19
PACS2Q86VP3 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.19
PACS2Q86VP3 RNF183-206ENST00000478815 2312 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PACS2Q86VP3 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
PACS2Q86VP3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 TRPV6-201ENST00000359396 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 PIK3R5-216ENST00000584803 2653 ntAPPRIS ALT1 TSL 5 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 REEP3-201ENST00000373758 5205 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 ZNF718-202ENST00000609714 2772 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 AC004870.1-201ENST00000315132 882 ntBASIC16.26■□□□□ 0.19
PACS2Q86VP3 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 FAAP100-202ENST00000425898 2996 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 COL25A1-203ENST00000399132 2724 ntAPPRIS P4 TSL 5 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 TCAF1P1-201ENST00000414990 2232 ntBASIC16.26■□□□□ 0.19
PACS2Q86VP3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
PACS2Q86VP3 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
PACS2Q86VP3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 OFD1-202ENST00000380550 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 USP17L2-201ENST00000333796 1910 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
PACS2Q86VP3 ATP2C1-214ENST00000508532 4969 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
PACS2Q86VP3 FRMD8P1-201ENST00000440433 1524 ntBASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 57.9 ms