Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
DENND4AQ7Z401 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.21■□□□□ 0.18
DENND4AQ7Z401 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.21■□□□□ 0.18
DENND4AQ7Z401 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.21■□□□□ 0.18
DENND4AQ7Z401 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC16.21■□□□□ 0.18
DENND4AQ7Z401 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 CDK2-202ENST00000354056 1260 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 ECM1P1-201ENST00000604092 1279 ntBASIC16.2■□□□□ 0.18
DENND4AQ7Z401 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 AHCYP2-201ENST00000430630 1300 ntBASIC16.2■□□□□ 0.18
DENND4AQ7Z401 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 ELK2AP-201ENST00000392510 1007 ntBASIC16.2■□□□□ 0.18
DENND4AQ7Z401 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC16.2■□□□□ 0.18
DENND4AQ7Z401 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 CYB5R3-203ENST00000402438 1050 ntTSL 5 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 C17orf51-202ENST00000412778 877 ntAPPRIS ALT2 TSL 3 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 EIF4HP1-201ENST00000453115 687 ntBASIC16.19■□□□□ 0.18
DENND4AQ7Z401 PARP8-206ENST00000503665 572 ntTSL 4 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 AP003171.2-201ENST00000528208 925 ntBASIC16.19■□□□□ 0.18
DENND4AQ7Z401 AC006453.4-201ENST00000636949 1252 ntBASIC16.19■□□□□ 0.18
DENND4AQ7Z401 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 KRT8P19-201ENST00000551916 1455 ntBASIC16.19■□□□□ 0.18
DENND4AQ7Z401 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 FP565260.3-204ENST00000623795 2238 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.19■□□□□ 0.18
DENND4AQ7Z401 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 GAPDHP40-201ENST00000505218 1006 ntBASIC16.18■□□□□ 0.18
DENND4AQ7Z401 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 ADM-202ENST00000524948 584 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 EGLN2-209ENST00000594140 991 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 VAMP1-203ENST00000400911 1068 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 AL445430.1-201ENST00000419796 699 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
DENND4AQ7Z401 AC079178.1-201ENST00000420915 656 ntBASIC16.18■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms