Protein–RNA interactions for Protein: Q5JTY5

CBWD3, COBW domain-containing protein 3, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3Q5JTY5 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CBWD3Q5JTY5 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 FLII-221ENST00000578558 2377 ntTSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 AC092127.1-201ENST00000567093 3455 ntBASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 MDH2-205ENST00000461263 648 ntTSL 2 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 MIR4313-201ENST00000580760 101 ntBASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 AC007967.4-201ENST00000614700 386 ntBASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 MIR6080-201ENST00000617359 66 ntBASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 EVC2-202ENST00000344408 4390 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 HYMAI-201ENST00000635591 3347 ntBASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 KIAA1755-206ENST00000496900 2557 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
CBWD3Q5JTY5 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 MMADHC-203ENST00000428879 1726 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 TMEM147-AS1-203ENST00000589137 1627 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 AC092384.3-202ENST00000564646 2873 ntBASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 DAD1-205ENST00000543337 501 ntTSL 3 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 LITAF-210ENST00000571976 548 ntTSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 LITAF-214ENST00000574703 486 ntTSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 LINC00628-201ENST00000628516 1289 ntBASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CBWD3Q5JTY5 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.29■□□□□ 0.36
CBWD3Q5JTY5 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC17.29■□□□□ 0.36
CBWD3Q5JTY5 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBWD3Q5JTY5 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC17.29■□□□□ 0.36
CBWD3Q5JTY5 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CBWD3Q5JTY5 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC17.29■□□□□ 0.36
CBWD3Q5JTY5 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
CBWD3Q5JTY5 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms