Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 AZGP1P1-201ENST00000411909 902 ntBASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 ZFAND2B-212ENST00000444522 1199 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 SATB1-217ENST00000493952 626 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 AC243965.1-201ENST00000557595 781 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 UBE2Q2L-201ENST00000558195 498 ntAPPRIS P1 TSL 2 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 CICP13-201ENST00000422015 2789 ntBASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC16.86■□□□□ 0.29
PTPN20Q4JDL3 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 FLII-221ENST00000578558 2377 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 HIST3H2BA-201ENST00000436555 524 ntBASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 AC004449.1-201ENST00000564240 433 ntBASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 AC015911.4-201ENST00000588022 1070 ntBASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 DHX40-202ENST00000425628 2255 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 IMPDH1P4-201ENST00000445028 1534 ntBASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PTPN20Q4JDL3 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 AL139384.1-201ENST00000612143 3047 ntBASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 RPS19-201ENST00000221975 500 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 KLK8-202ENST00000320838 456 ntTSL 5 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 CDH23-AS1-201ENST00000428918 378 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 METTL21AP1-201ENST00000438852 635 ntBASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC16.84■□□□□ 0.29
PTPN20Q4JDL3 CNN2P2-201ENST00000443536 909 ntBASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms