Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 TSFM-210ENST00000550559 897 ntTSL 5 BASIC15.51■□□□□ 0.07
PCDH1Q08174 RARRES2P9-201ENST00000565168 469 ntBASIC15.51■□□□□ 0.07
PCDH1Q08174 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH1Q08174 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH1Q08174 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH1Q08174 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH1Q08174 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC15.51■□□□□ 0.07
PCDH1Q08174 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH1Q08174 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC15.51■□□□□ 0.07
PCDH1Q08174 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC15.51■□□□□ 0.07
PCDH1Q08174 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC15.51■□□□□ 0.07
PCDH1Q08174 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH1Q08174 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC15.51■□□□□ 0.07
PCDH1Q08174 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC15.51■□□□□ 0.07
PCDH1Q08174 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.51■□□□□ 0.07
PCDH1Q08174 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC15.51■□□□□ 0.07
PCDH1Q08174 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC15.5■□□□□ 0.07
PCDH1Q08174 FUK-207ENST00000571514 3054 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 FAM109A-203ENST00000547838 2846 ntAPPRIS P3 TSL 4 BASIC15.5■□□□□ 0.07
PCDH1Q08174 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 BNIP3P1-202ENST00000550043 1585 ntBASIC15.5■□□□□ 0.07
PCDH1Q08174 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 AC134407.2-201ENST00000625089 1978 ntBASIC15.5■□□□□ 0.07
PCDH1Q08174 KLK8-202ENST00000320838 456 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH1Q08174 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC15.5■□□□□ 0.07
PCDH1Q08174 CD82-202ENST00000342935 967 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH1Q08174 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH1Q08174 RPSAP43-201ENST00000402237 625 ntBASIC15.5■□□□□ 0.07
PCDH1Q08174 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 AL139010.1-201ENST00000454878 894 ntBASIC15.5■□□□□ 0.07
PCDH1Q08174 MDH2-205ENST00000461263 648 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 AP000344.2-201ENST00000512987 629 ntBASIC15.5■□□□□ 0.07
PCDH1Q08174 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC15.5■□□□□ 0.07
PCDH1Q08174 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC15.5■□□□□ 0.07
PCDH1Q08174 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 PNKD-202ENST00000258362 2991 ntAPPRIS ALT2 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 WDR81-204ENST00000419248 3315 ntTSL 2 BASIC15.5■□□□□ 0.07
PCDH1Q08174 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC15.5■□□□□ 0.07
PCDH1Q08174 AKAP9-205ENST00000394564 1356 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH1Q08174 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH1Q08174 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 BANP-201ENST00000286122 2368 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 RIMS1-213ENST00000517960 4428 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 RIMS1-215ENST00000520567 4442 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
PCDH1Q08174 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH1Q08174 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
PCDH1Q08174 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDH1Q08174 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDH1Q08174 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDH1Q08174 AC112482.1-201ENST00000492080 688 ntBASIC15.49■□□□□ 0.07
PCDH1Q08174 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.49■□□□□ 0.07
PCDH1Q08174 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC15.49■□□□□ 0.07
PCDH1Q08174 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 MIR4469-201ENST00000583919 79 ntBASIC15.49■□□□□ 0.07
PCDH1Q08174 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.49■□□□□ 0.07
PCDH1Q08174 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 AC026979.3-201ENST00000607315 403 ntBASIC15.49■□□□□ 0.07
PCDH1Q08174 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC15.49■□□□□ 0.07
PCDH1Q08174 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 EPB41L3-203ENST00000400111 4259 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
PCDH1Q08174 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
PCDH1Q08174 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.49■□□□□ 0.07
PCDH1Q08174 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC15.48■□□□□ 0.07
PCDH1Q08174 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms