Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC107918.2-201ENST00000530817 355 ntBASIC11.42□□□□□ -0.58
RPL39P62891 CSRP1-214ENST00000531916 890 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 LTBR-211ENST00000543190 785 ntTSL 3 BASIC11.42□□□□□ -0.58
RPL39P62891 NKAPP1-205ENST00000585790 367 ntBASIC11.42□□□□□ -0.58
RPL39P62891 AC092329.2-201ENST00000598402 547 ntBASIC11.42□□□□□ -0.58
RPL39P62891 AL591684.3-201ENST00000605187 298 ntBASIC11.42□□□□□ -0.58
RPL39P62891 AL589182.2-201ENST00000619332 1049 ntBASIC11.42□□□□□ -0.58
RPL39P62891 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC11.42□□□□□ -0.58
RPL39P62891 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 GSN-215ENST00000545652 2428 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 CELP-203ENST00000624767 2414 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 PROZ-202ENST00000375547 1488 ntAPPRIS P3 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 AC090616.6-203ENST00000579186 1945 ntBASIC11.42□□□□□ -0.58
RPL39P62891 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC11.42□□□□□ -0.58
RPL39P62891 CAPN5-202ENST00000456580 2805 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 UBTF-201ENST00000302904 4997 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 CICP23-201ENST00000605013 2741 ntBASIC11.42□□□□□ -0.58
RPL39P62891 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC11.42□□□□□ -0.58
RPL39P62891 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC11.42□□□□□ -0.58
RPL39P62891 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 TMEM200C-202ENST00000581347 10638 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 MSH5-203ENST00000375750 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 ARMC10P1-201ENST00000313754 855 ntBASIC11.41□□□□□ -0.58
RPL39P62891 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC11.41□□□□□ -0.58
RPL39P62891 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 PPOX-219ENST00000544598 813 ntTSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC11.41□□□□□ -0.58
RPL39P62891 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 WT1-AS_2.1-201ENST00000613208 137 ntBASIC11.41□□□□□ -0.58
RPL39P62891 BSG-214ENST00000614867 960 ntTSL 3 BASIC11.41□□□□□ -0.58
RPL39P62891 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 AL121956.5-201ENST00000625261 221 ntBASIC11.41□□□□□ -0.58
RPL39P62891 CCNC-219ENST00000627680 896 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 CYB561A3-203ENST00000447532 1803 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 LOX-206ENST00000639739 1626 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC11.41□□□□□ -0.58
RPL39P62891 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC11.41□□□□□ -0.58
RPL39P62891 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC11.41□□□□□ -0.58
RPL39P62891 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC11.41□□□□□ -0.58
RPL39P62891 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC11.4□□□□□ -0.58
RPL39P62891 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC11.4□□□□□ -0.58
RPL39P62891 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 AHCYL2-202ENST00000446544 5026 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 PCTP-201ENST00000268896 2044 ntAPPRIS P1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC11.4□□□□□ -0.58
RPL39P62891 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC11.4□□□□□ -0.58
RPL39P62891 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC11.4□□□□□ -0.58
RPL39P62891 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC11.4□□□□□ -0.58
RPL39P62891 AL359258.3-201ENST00000622910 2331 ntBASIC11.4□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 53.7 ms