Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCR4P61073 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCR4P61073 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC14.68□□□□□ -0.06
CXCR4P61073 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCR4P61073 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCR4P61073 EHF-205ENST00000527935 557 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 L2HGDH-205ENST00000555423 841 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 L2HGDH-206ENST00000555610 804 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCR4P61073 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC14.68□□□□□ -0.06
CXCR4P61073 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC14.68□□□□□ -0.06
CXCR4P61073 TTLL3-213ENST00000430793 2097 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CXCR4P61073 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 BCL11A-201ENST00000335712 5942 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.68□□□□□ -0.06
CXCR4P61073 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 JPH4-205ENST00000622501 3489 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CXCR4P61073 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CXCR4P61073 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
CXCR4P61073 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
CXCR4P61073 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 BANP-203ENST00000393207 2438 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCR4P61073 CELP-203ENST00000624767 2414 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCR4P61073 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 BHMG1-201ENST00000457052 2749 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CXCR4P61073 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
CXCR4P61073 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 TTC22-202ENST00000371276 3345 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCR4P61073 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
CXCR4P61073 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC14.67□□□□□ -0.06
CXCR4P61073 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCR4P61073 FGFR3P6-201ENST00000457012 610 ntBASIC14.67□□□□□ -0.06
CXCR4P61073 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC14.67□□□□□ -0.06
CXCR4P61073 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.67□□□□□ -0.06
CXCR4P61073 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC14.67□□□□□ -0.06
CXCR4P61073 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
CXCR4P61073 AC008608.2-201ENST00000606089 416 ntBASIC14.67□□□□□ -0.06
CXCR4P61073 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 AL805961.1-202ENST00000641562 540 ntBASIC14.67□□□□□ -0.06
CXCR4P61073 AC104581.4-201ENST00000623126 3052 ntBASIC14.67□□□□□ -0.06
CXCR4P61073 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC14.67□□□□□ -0.06
CXCR4P61073 XPO6-201ENST00000304658 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 AC006504.4-201ENST00000592118 1568 ntBASIC14.67□□□□□ -0.06
CXCR4P61073 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
CXCR4P61073 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
CXCR4P61073 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CXCR4P61073 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC14.66□□□□□ -0.06
CXCR4P61073 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CXCR4P61073 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms