Protein–RNA interactions for Protein: P55854

SUMO3, Small ubiquitin-related modifier 3, humanhuman

Predicted RBP Predictions only

Length 103 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO3P55854 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SUMO3P55854 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
SUMO3P55854 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SUMO3P55854 PDSS2-201ENST00000369031 1236 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 VMA21-202ENST00000370361 693 ntTSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 AC092183.1-201ENST00000469884 875 ntBASIC14.51□□□□□ -0.09
SUMO3P55854 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.51□□□□□ -0.09
SUMO3P55854 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.51□□□□□ -0.09
SUMO3P55854 AC020659.2-201ENST00000510176 585 ntTSL 4 BASIC14.51□□□□□ -0.09
SUMO3P55854 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.51□□□□□ -0.09
SUMO3P55854 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.51□□□□□ -0.09
SUMO3P55854 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.51□□□□□ -0.09
SUMO3P55854 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SUMO3P55854 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 CRLF2-203ENST00000400841 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 LLGL2-201ENST00000167462 3480 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC14.51□□□□□ -0.09
SUMO3P55854 SCPEP1-201ENST00000262288 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SUMO3P55854 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SUMO3P55854 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 TNRC18P3-201ENST00000441896 2691 ntBASIC14.5□□□□□ -0.09
SUMO3P55854 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 FLII-221ENST00000578558 2377 ntTSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 AZGP1P1-201ENST00000411909 902 ntBASIC14.5□□□□□ -0.09
SUMO3P55854 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 AC136604.1-201ENST00000418535 575 ntBASIC14.5□□□□□ -0.09
SUMO3P55854 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC14.5□□□□□ -0.09
SUMO3P55854 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC14.5□□□□□ -0.09
SUMO3P55854 AC020558.1-201ENST00000583662 425 ntTSL 3 BASIC14.5□□□□□ -0.09
SUMO3P55854 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.5□□□□□ -0.09
SUMO3P55854 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 LRRFIP1P1-201ENST00000498774 2246 ntBASIC14.5□□□□□ -0.09
SUMO3P55854 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC14.5□□□□□ -0.09
SUMO3P55854 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SUMO3P55854 MAPT-201ENST00000262410 6762 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 NT5C3A-204ENST00000405342 1759 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SUMO3P55854 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.49□□□□□ -0.09
SUMO3P55854 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 VASP-201ENST00000245932 2305 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.49□□□□□ -0.09
SUMO3P55854 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SUMO3P55854 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
SUMO3P55854 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.49□□□□□ -0.09
SUMO3P55854 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SUMO3P55854 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SUMO3P55854 PDCD2L-201ENST00000246535 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms