Protein–RNA interactions for Protein: P55316

FOXG1, Forkhead box protein G1, humanhuman

Predicted RBP Predictions only

Length 489 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXG1P55316 PTK7-212ENST00000476760 902 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXG1P55316 RN7SL618P-201ENST00000477850 296 ntBASIC14.05□□□□□ -0.16
FOXG1P55316 FXR1-221ENST00000491674 365 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXG1P55316 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
FOXG1P55316 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
FOXG1P55316 SPIB-207ENST00000597855 564 ntTSL 4 BASIC14.05□□□□□ -0.16
FOXG1P55316 AC004790.1-201ENST00000612686 536 ntBASIC14.05□□□□□ -0.16
FOXG1P55316 RAB34-223ENST00000636154 730 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXG1P55316 ATP6AP2-233ENST00000638153 1303 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
FOXG1P55316 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC14.05□□□□□ -0.16
FOXG1P55316 GDPD3-202ENST00000406256 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
FOXG1P55316 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXG1P55316 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXG1P55316 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC14.05□□□□□ -0.16
FOXG1P55316 AL513523.2-202ENST00000427283 2040 ntBASIC14.05□□□□□ -0.16
FOXG1P55316 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 PRAL-201ENST00000624952 3286 ntBASIC14.05□□□□□ -0.16
FOXG1P55316 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC14.05□□□□□ -0.16
FOXG1P55316 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
FOXG1P55316 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 ADGRA1-202ENST00000392607 4283 ntAPPRIS P2 TSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 KRT2-201ENST00000309680 2403 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 AC236430.1-201ENST00000402231 743 ntBASIC14.04□□□□□ -0.16
FOXG1P55316 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC14.04□□□□□ -0.16
FOXG1P55316 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC14.04□□□□□ -0.16
FOXG1P55316 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 SPDYE18-201ENST00000510091 1050 ntBASIC14.04□□□□□ -0.16
FOXG1P55316 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 SNHG6-201ENST00000520348 648 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 STOM-203ENST00000538954 1257 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 MIR4745-201ENST00000577608 62 ntBASIC14.04□□□□□ -0.16
FOXG1P55316 RN7SL204P-201ENST00000582831 262 ntBASIC14.04□□□□□ -0.16
FOXG1P55316 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC14.04□□□□□ -0.16
FOXG1P55316 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 AL109936.8-201ENST00000641772 604 ntBASIC14.04□□□□□ -0.16
FOXG1P55316 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC14.04□□□□□ -0.16
FOXG1P55316 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 POR-218ENST00000461988 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC14.04□□□□□ -0.16
FOXG1P55316 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC14.04□□□□□ -0.16
FOXG1P55316 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXG1P55316 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXG1P55316 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXG1P55316 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXG1P55316 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXG1P55316 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXG1P55316 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXG1P55316 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 RCAN3-204ENST00000425530 997 ntTSL 5 BASIC14.03□□□□□ -0.16
FOXG1P55316 AC008406.2-201ENST00000507058 532 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXG1P55316 SERBP1P5-201ENST00000510079 1181 ntBASIC14.03□□□□□ -0.16
FOXG1P55316 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC14.03□□□□□ -0.16
FOXG1P55316 RAB35-202ENST00000534951 939 ntTSL 2 BASIC14.03□□□□□ -0.16
FOXG1P55316 SUOX-214ENST00000551841 906 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXG1P55316 AC004846.2-201ENST00000556578 777 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXG1P55316 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.03□□□□□ -0.16
FOXG1P55316 AC025048.3-201ENST00000590609 569 ntBASIC14.03□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms