Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 AC009407.1-201ENST00000568958 598 ntBASIC17.52■□□□□ 0.4
NCKAP1LP55160 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 AC141424.1-203ENST00000599026 887 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 PDZD8-201ENST00000334464 9699 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.52■□□□□ 0.4
NCKAP1LP55160 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
NCKAP1LP55160 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC17.52■□□□□ 0.39
NCKAP1LP55160 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
NCKAP1LP55160 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCKAP1LP55160 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NCKAP1LP55160 VILL-207ENST00000465644 1857 ntTSL 5 BASIC17.52■□□□□ 0.39
NCKAP1LP55160 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
NCKAP1LP55160 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.39
NCKAP1LP55160 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC17.52■□□□□ 0.39
NCKAP1LP55160 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 AC011270.2-201ENST00000624293 2550 ntBASIC17.51■□□□□ 0.39
NCKAP1LP55160 Z97205.2-201ENST00000564697 1639 ntBASIC17.51■□□□□ 0.39
NCKAP1LP55160 GRN-214ENST00000589265 1632 ntTSL 5 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 TSEN2-207ENST00000454502 1909 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 AP005117.1-202ENST00000581724 1908 ntBASIC17.51■□□□□ 0.39
NCKAP1LP55160 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 RAC2-202ENST00000401529 569 ntTSL 4 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 IGFBP2-204ENST00000456764 846 ntTSL 3 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 AP3S2-204ENST00000558011 738 ntTSL 3 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 MIR4313-201ENST00000580760 101 ntBASIC17.51■□□□□ 0.39
NCKAP1LP55160 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 AC022144.1-201ENST00000602255 1580 ntBASIC17.51■□□□□ 0.39
NCKAP1LP55160 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 TRIM9-202ENST00000338969 3312 ntTSL 2 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 TRMT1-203ENST00000437766 2263 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 CARS-203ENST00000397111 2685 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
NCKAP1LP55160 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.51■□□□□ 0.39
NCKAP1LP55160 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 FAM156B-202ENST00000509613 1701 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 TMEM53-204ENST00000372243 1579 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 TAAR5-201ENST00000258034 1014 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 TARDBPP1-201ENST00000442013 1203 ntBASIC17.5■□□□□ 0.39
NCKAP1LP55160 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 AL161781.2-201ENST00000509911 739 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 RNA5SP421-201ENST00000516864 134 ntBASIC17.5■□□□□ 0.39
NCKAP1LP55160 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 AC044860.1-202ENST00000559481 777 ntBASIC17.5■□□□□ 0.39
NCKAP1LP55160 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 NAA60-208ENST00000570819 833 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 RCAN3-211ENST00000630217 658 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 LMNA-203ENST00000368297 1679 ntTSL 2 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 EIF4E1B-203ENST00000504597 1676 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
NCKAP1LP55160 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
NCKAP1LP55160 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 43.2 ms