Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 MRPS18AP1-201ENST00000414458 589 ntBASIC11.76□□□□□ -0.53
APOC4P55056 MEP1AP4-201ENST00000423244 1087 ntBASIC11.76□□□□□ -0.53
APOC4P55056 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC11.76□□□□□ -0.53
APOC4P55056 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 TIMM17BP1-201ENST00000545713 516 ntBASIC11.76□□□□□ -0.53
APOC4P55056 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC11.76□□□□□ -0.53
APOC4P55056 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 5S_rRNA.22-201ENST00000614916 106 ntBASIC11.76□□□□□ -0.53
APOC4P55056 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC11.76□□□□□ -0.53
APOC4P55056 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 MROH1-209ENST00000534366 5092 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 AL691432.1-201ENST00000596308 1422 ntBASIC11.76□□□□□ -0.53
APOC4P55056 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 ADAMTS13-201ENST00000355699 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
APOC4P55056 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 JADE2-203ENST00000395003 6465 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
APOC4P55056 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC11.76□□□□□ -0.53
APOC4P55056 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC11.76□□□□□ -0.53
APOC4P55056 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC11.75□□□□□ -0.53
APOC4P55056 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
APOC4P55056 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC11.75□□□□□ -0.53
APOC4P55056 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC11.75□□□□□ -0.53
APOC4P55056 SUOX-214ENST00000551841 906 ntTSL 3 BASIC11.75□□□□□ -0.53
APOC4P55056 AL512361.1-201ENST00000554200 418 ntBASIC11.75□□□□□ -0.53
APOC4P55056 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC11.75□□□□□ -0.53
APOC4P55056 DUSP13-214ENST00000607131 1019 ntAPPRIS P3 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 AC074044.1-201ENST00000609673 707 ntBASIC11.75□□□□□ -0.53
APOC4P55056 RNA5-8SN1-201ENST00000610460 153 ntBASIC11.75□□□□□ -0.53
APOC4P55056 RNA5-8SN5-202ENST00000612463 153 ntBASIC11.75□□□□□ -0.53
APOC4P55056 RNA5-8SN4-201ENST00000613359 153 ntBASIC11.75□□□□□ -0.53
APOC4P55056 RNA5-8SN5-201ENST00000619471 153 ntBASIC11.75□□□□□ -0.53
APOC4P55056 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 AKR7L-202ENST00000429712 1313 ntAPPRIS P5 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC11.75□□□□□ -0.53
APOC4P55056 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 AL391825.1-201ENST00000457671 1364 ntBASIC11.75□□□□□ -0.53
APOC4P55056 TDG-209ENST00000544861 1387 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 AC002310.1-201ENST00000457283 1445 ntTSL 2 BASIC11.75□□□□□ -0.53
APOC4P55056 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC11.75□□□□□ -0.53
APOC4P55056 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC11.75□□□□□ -0.53
APOC4P55056 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC11.75□□□□□ -0.53
APOC4P55056 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC11.75□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms