Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC16.62■□□□□ 0.25
COPAP53621 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COPAP53621 CDC25C-207ENST00000513970 1968 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
COPAP53621 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 FDX1-201ENST00000260270 3206 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
COPAP53621 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
COPAP53621 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC16.62■□□□□ 0.25
COPAP53621 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC16.62■□□□□ 0.25
COPAP53621 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 LINC00473-203ENST00000581850 929 ntTSL 3 BASIC16.62■□□□□ 0.25
COPAP53621 RPS15-212ENST00000593052 629 ntTSL 2 BASIC16.62■□□□□ 0.25
COPAP53621 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 AF228730.6-201ENST00000641497 218 ntBASIC16.62■□□□□ 0.25
COPAP53621 AC084121.3-201ENST00000641716 218 ntBASIC16.62■□□□□ 0.25
COPAP53621 AC105233.6-201ENST00000642093 218 ntBASIC16.62■□□□□ 0.25
COPAP53621 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 GRAMD4P3-201ENST00000621665 1669 ntBASIC16.62■□□□□ 0.25
COPAP53621 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
COPAP53621 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
COPAP53621 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 GP5-201ENST00000401815 3534 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
COPAP53621 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC16.61■□□□□ 0.25
COPAP53621 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.61■□□□□ 0.25
COPAP53621 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COPAP53621 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
COPAP53621 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC16.61■□□□□ 0.25
COPAP53621 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC16.61■□□□□ 0.25
COPAP53621 DPM2-202ENST00000373110 738 ntTSL 2 BASIC16.61■□□□□ 0.25
COPAP53621 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC16.61■□□□□ 0.25
COPAP53621 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC16.61■□□□□ 0.25
COPAP53621 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC16.61■□□□□ 0.25
COPAP53621 AP002490.2-201ENST00000524791 560 ntBASIC16.61■□□□□ 0.25
COPAP53621 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.61■□□□□ 0.25
COPAP53621 AC239800.4-201ENST00000603712 296 ntBASIC16.61■□□□□ 0.25
COPAP53621 GPER1-207ENST00000619052 571 ntTSL 2 BASIC16.61■□□□□ 0.25
COPAP53621 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.61■□□□□ 0.25
COPAP53621 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.61■□□□□ 0.25
COPAP53621 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC16.61■□□□□ 0.25
COPAP53621 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
COPAP53621 SLC12A5-209ENST00000616201 2955 ntTSL 5 BASIC16.61■□□□□ 0.25
COPAP53621 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC16.61■□□□□ 0.25
COPAP53621 AL391256.1-201ENST00000443260 1855 ntBASIC16.61■□□□□ 0.25
COPAP53621 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
COPAP53621 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
COPAP53621 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.6■□□□□ 0.25
COPAP53621 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 MTHFR-217ENST00000641820 1569 ntBASIC16.6■□□□□ 0.25
COPAP53621 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 HLA-F-216ENST00000259951 1635 ntAPPRIS P4 BASIC16.6■□□□□ 0.25
COPAP53621 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.6■□□□□ 0.25
COPAP53621 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC16.6■□□□□ 0.25
COPAP53621 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 COPE-202ENST00000349893 948 ntTSL 2 BASIC16.6■□□□□ 0.25
COPAP53621 CHIA-203ENST00000353665 1214 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC16.6■□□□□ 0.25
COPAP53621 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC16.6■□□□□ 0.25
COPAP53621 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.6■□□□□ 0.25
COPAP53621 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC16.6■□□□□ 0.25
COPAP53621 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC16.6■□□□□ 0.25
COPAP53621 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC16.6■□□□□ 0.25
COPAP53621 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
COPAP53621 ALOX12P2-203ENST00000570921 1945 ntBASIC16.6■□□□□ 0.25
COPAP53621 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 52.7 ms