Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AK4P3-201ENST00000418260 669 ntBASIC12.76□□□□□ -0.37
CDC34P49427 PMS2P1-201ENST00000431037 1228 ntBASIC12.76□□□□□ -0.37
CDC34P49427 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 PAWRP1-201ENST00000451083 565 ntBASIC12.76□□□□□ -0.37
CDC34P49427 AC087163.2-201ENST00000457299 853 ntBASIC12.76□□□□□ -0.37
CDC34P49427 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 AC087641.1-201ENST00000557561 1021 ntBASIC12.76□□□□□ -0.37
CDC34P49427 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC12.76□□□□□ -0.37
CDC34P49427 Z69720.1-201ENST00000601483 472 ntBASIC12.76□□□□□ -0.37
CDC34P49427 AC005363.2-201ENST00000618631 242 ntBASIC12.76□□□□□ -0.37
CDC34P49427 REXO1L3P-201ENST00000622202 1288 ntBASIC12.76□□□□□ -0.37
CDC34P49427 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CDC34P49427 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CDC34P49427 CICP23-201ENST00000605013 2741 ntBASIC12.76□□□□□ -0.37
CDC34P49427 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 USP38-202ENST00000510377 4135 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC12.76□□□□□ -0.37
CDC34P49427 AL353732.1-201ENST00000569618 1459 ntBASIC12.76□□□□□ -0.37
CDC34P49427 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
CDC34P49427 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC12.76□□□□□ -0.37
CDC34P49427 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC12.76□□□□□ -0.37
CDC34P49427 SLC9A3P3-201ENST00000457608 2229 ntBASIC12.76□□□□□ -0.37
CDC34P49427 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC12.76□□□□□ -0.37
CDC34P49427 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 AP002990.1-202ENST00000496634 5064 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
CDC34P49427 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
CDC34P49427 CEP63-212ENST00000513612 2903 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 ST7L-202ENST00000358039 4528 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 TCOF1-201ENST00000323668 4832 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CDC34P49427 CCDC94-201ENST00000262962 1434 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 KIF3C-201ENST00000264712 5344 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 TCHH-201ENST00000368804 6900 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CDC34P49427 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 GRM7-203ENST00000389336 2901 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 ZNF559-202ENST00000393883 5095 ntAPPRIS P3 TSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC34P49427 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC12.75□□□□□ -0.37
CDC34P49427 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 SH2D3C-206ENST00000429553 2794 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC12.75□□□□□ -0.37
CDC34P49427 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 SLC22A20-204ENST00000530038 1673 ntBASIC12.75□□□□□ -0.37
CDC34P49427 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC34P49427 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 NTF6B-201ENST00000591913 560 ntBASIC12.75□□□□□ -0.37
CDC34P49427 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 BNIP3P18-201ENST00000593976 575 ntBASIC12.75□□□□□ -0.37
CDC34P49427 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC34P49427 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 RAPH1-202ENST00000319170 9808 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC12.75□□□□□ -0.37
CDC34P49427 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
CDC34P49427 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
CDC34P49427 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
CDC34P49427 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 ITGBL1-207ENST00000622834 2369 ntTSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 DSE-202ENST00000359564 4037 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 WDR59-201ENST00000262144 5898 ntAPPRIS P1 TSL 5 BASIC12.74□□□□□ -0.37
CDC34P49427 GTF2IRD1-205ENST00000476977 5868 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 ANO6-202ENST00000423947 5504 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
CDC34P49427 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC12.74□□□□□ -0.37
CDC34P49427 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms