Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 FGFR3P6-201ENST00000457012 610 ntBASIC18.35■□□□□ 0.53
CLCN1P35523 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC18.35■□□□□ 0.53
CLCN1P35523 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN1P35523 ZFP41-201ENST00000330701 4797 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CLCN1P35523 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 PDXDC1-204ENST00000455313 2183 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN1P35523 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCN1P35523 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
CLCN1P35523 MAP3K11-208ENST00000530153 2830 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN1P35523 RNF122-201ENST00000256257 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.35■□□□□ 0.53
CLCN1P35523 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CLCN1P35523 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN1P35523 FGD5P1-202ENST00000614866 2498 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 AC092919.2-201ENST00000623631 1645 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC18.34■□□□□ 0.53
CLCN1P35523 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 CLDN7-201ENST00000360325 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN1P35523 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 CNTNAP3P2-201ENST00000617175 3861 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCN1P35523 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN1P35523 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC18.34■□□□□ 0.53
CLCN1P35523 SART3-203ENST00000546611 1184 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC18.34■□□□□ 0.53
CLCN1P35523 AL353135.1-201ENST00000606729 504 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 AL139288.1-201ENST00000623748 933 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 AL022326.1-202ENST00000641533 845 ntBASIC18.34■□□□□ 0.53
CLCN1P35523 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN1P35523 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.34■□□□□ 0.53
CLCN1P35523 OR4D1-202ENST00000641449 4925 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CLCN1P35523 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 DBH-AS1-201ENST00000425189 2139 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 SLC35C1-201ENST00000314134 4171 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
CLCN1P35523 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN1P35523 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN1P35523 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN1P35523 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CLCN1P35523 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCN1P35523 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
CLCN1P35523 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN1P35523 GJD2-201ENST00000290374 2889 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN1P35523 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
CLCN1P35523 OFD1-204ENST00000398395 3307 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CLCN1P35523 AC027612.1-201ENST00000445234 2395 ntBASIC18.33■□□□□ 0.53
CLCN1P35523 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN1P35523 PCDHGB5-202ENST00000621169 2670 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.53
CLCN1P35523 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.53
CLCN1P35523 CYP1B1-AS1-201ENST00000413828 1781 ntTSL 5 BASIC18.33■□□□□ 0.53
CLCN1P35523 TMEM41B-204ENST00000528080 3968 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CLCN1P35523 AL590787.1-201ENST00000568856 1315 ntBASIC18.33■□□□□ 0.53
CLCN1P35523 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN1P35523 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN1P35523 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLCN1P35523 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCN1P35523 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN1P35523 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLCN1P35523 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN1P35523 KRT18P56-201ENST00000507275 550 ntBASIC18.33■□□□□ 0.52
CLCN1P35523 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CLCN1P35523 AF238378.1-201ENST00000526806 358 ntBASIC18.33■□□□□ 0.52
CLCN1P35523 SDHD-206ENST00000528182 754 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN1P35523 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN1P35523 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.52
CLCN1P35523 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN1P35523 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN1P35523 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN1P35523 AC008608.2-201ENST00000606089 416 ntBASIC18.33■□□□□ 0.52
CLCN1P35523 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.52
CLCN1P35523 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
CLCN1P35523 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN1P35523 PBX3-203ENST00000373487 2902 ntTSL 5 BASIC18.33■□□□□ 0.52
CLCN1P35523 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CLCN1P35523 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN1P35523 AJ011931.1-201ENST00000618749 2492 ntBASIC18.33■□□□□ 0.52
CLCN1P35523 LINC00887-202ENST00000414120 2880 ntTSL 3 BASIC18.33■□□□□ 0.52
CLCN1P35523 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CLCN1P35523 MED12L-203ENST00000422248 2757 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
CLCN1P35523 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.33■□□□□ 0.52
CLCN1P35523 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 38.1 ms