Protein–RNA interactions for Protein: P35251

RFC1, Replication factor C subunit 1, humanhuman

Predicted RBP Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1P35251 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.97■□□□□ 0.31
RFC1P35251 RNA5SP410-201ENST00000516285 106 ntBASIC16.97■□□□□ 0.31
RFC1P35251 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 AC092865.5-201ENST00000545435 363 ntBASIC16.97■□□□□ 0.31
RFC1P35251 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC16.97■□□□□ 0.31
RFC1P35251 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.97■□□□□ 0.31
RFC1P35251 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC1P35251 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC16.97■□□□□ 0.31
RFC1P35251 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.97■□□□□ 0.31
RFC1P35251 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC1P35251 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC1P35251 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.97■□□□□ 0.31
RFC1P35251 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC16.97■□□□□ 0.31
RFC1P35251 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
RFC1P35251 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC16.97■□□□□ 0.31
RFC1P35251 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC1P35251 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC1P35251 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC1P35251 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC1P35251 FAM58DP-201ENST00000428076 619 ntBASIC16.96■□□□□ 0.31
RFC1P35251 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC1P35251 CCND1-203ENST00000536559 553 ntTSL 3 BASIC16.96■□□□□ 0.31
RFC1P35251 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC16.96■□□□□ 0.31
RFC1P35251 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC16.96■□□□□ 0.31
RFC1P35251 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC16.96■□□□□ 0.31
RFC1P35251 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 AP3S2-216ENST00000617003 1561 ntBASIC16.96■□□□□ 0.31
RFC1P35251 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.31
RFC1P35251 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 AC134407.2-201ENST00000625089 1978 ntBASIC16.96■□□□□ 0.31
RFC1P35251 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC16.96■□□□□ 0.31
RFC1P35251 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
RFC1P35251 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
RFC1P35251 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RFC1P35251 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
RFC1P35251 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 TSPY26P-202ENST00000565928 3884 ntBASIC16.95■□□□□ 0.3
RFC1P35251 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 DHX36-202ENST00000329463 2985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 HLA-H-201ENST00000383620 1096 ntBASIC16.95■□□□□ 0.3
RFC1P35251 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.95■□□□□ 0.3
RFC1P35251 AC005237.2-201ENST00000434368 219 ntBASIC16.95■□□□□ 0.3
RFC1P35251 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC16.95■□□□□ 0.3
RFC1P35251 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC16.95■□□□□ 0.3
RFC1P35251 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 LHFPL2-207ENST00000515007 4680 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC16.95■□□□□ 0.3
RFC1P35251 DHDH-204ENST00000523250 634 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC16.95■□□□□ 0.3
RFC1P35251 CALM1-205ENST00000553542 877 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC16.95■□□□□ 0.3
RFC1P35251 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RFC1P35251 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
RFC1P35251 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RFC1P35251 AC105917.1-201ENST00000506637 2539 ntBASIC16.95■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms