Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.89□□□□□ -0.51
CKS2P33552 CICP23-201ENST00000605013 2741 ntBASIC11.89□□□□□ -0.51
CKS2P33552 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 UNC5C-202ENST00000504962 1789 ntTSL 2 BASIC11.89□□□□□ -0.51
CKS2P33552 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC11.89□□□□□ -0.51
CKS2P33552 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC11.89□□□□□ -0.51
CKS2P33552 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC11.89□□□□□ -0.51
CKS2P33552 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 IL1RN-202ENST00000354115 1747 ntTSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC11.89□□□□□ -0.51
CKS2P33552 BRWD1-201ENST00000333229 10141 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 NCOR2-202ENST00000404121 7175 ntTSL 5 BASIC11.88□□□□□ -0.51
CKS2P33552 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC11.88□□□□□ -0.51
CKS2P33552 ROBO4-201ENST00000306534 4710 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 RAB2A-201ENST00000262646 3848 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 DOCK4-206ENST00000437633 6212 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC11.88□□□□□ -0.51
CKS2P33552 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 SPDYE21P-201ENST00000413323 827 ntBASIC11.88□□□□□ -0.51
CKS2P33552 AL845331.1-201ENST00000424978 1190 ntBASIC11.88□□□□□ -0.51
CKS2P33552 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC11.88□□□□□ -0.51
CKS2P33552 TSPY15P-201ENST00000457163 923 ntBASIC11.88□□□□□ -0.51
CKS2P33552 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC11.88□□□□□ -0.51
CKS2P33552 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC11.88□□□□□ -0.51
CKS2P33552 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC11.88□□□□□ -0.51
CKS2P33552 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC11.88□□□□□ -0.51
CKS2P33552 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 COPE-211ENST00000600932 1144 ntTSL 5 BASIC11.88□□□□□ -0.51
CKS2P33552 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 AC005622.1-201ENST00000636801 1703 ntBASIC11.88□□□□□ -0.51
CKS2P33552 NOTCH1-201ENST00000277541 9371 ntAPPRIS P1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CKS2P33552 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC11.88□□□□□ -0.51
CKS2P33552 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC11.88□□□□□ -0.51
CKS2P33552 CUX1-215ENST00000556210 4044 ntAPPRIS ALT2 TSL 5 BASIC11.88□□□□□ -0.51
CKS2P33552 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC11.88□□□□□ -0.51
CKS2P33552 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC11.88□□□□□ -0.51
CKS2P33552 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 QRFP-202ENST00000623824 1658 ntAPPRIS P1 TSL 3 BASIC11.87□□□□□ -0.51
CKS2P33552 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 CICP4-201ENST00000447359 2812 ntBASIC11.87□□□□□ -0.51
CKS2P33552 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 AL590787.1-201ENST00000568856 1315 ntBASIC11.87□□□□□ -0.51
CKS2P33552 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 AL731571.1-201ENST00000617058 5428 ntBASIC11.87□□□□□ -0.51
CKS2P33552 RIC1-204ENST00000418622 6658 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC11.87□□□□□ -0.51
CKS2P33552 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 VAPA-202ENST00000400000 6815 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 LINC00528-201ENST00000600723 2160 ntBASIC11.87□□□□□ -0.51
CKS2P33552 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 CPVL-202ENST00000396276 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 KLHL9-201ENST00000359039 5710 ntAPPRIS P1 BASIC11.87□□□□□ -0.51
CKS2P33552 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC11.87□□□□□ -0.51
CKS2P33552 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC11.87□□□□□ -0.51
CKS2P33552 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.87□□□□□ -0.51
CKS2P33552 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC11.87□□□□□ -0.51
Retrieved 100 of 98,524 protein–RNA pairs in 37.4 ms