Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HOXC8P31273 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HOXC8P31273 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HOXC8P31273 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HOXC8P31273 POLL-217ENST00000628479 1953 ntTSL 5 BASIC17.28■□□□□ 0.36
HOXC8P31273 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
HOXC8P31273 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC8P31273 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC8P31273 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC8P31273 CHST10-203ENST00000409701 1338 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC8P31273 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC8P31273 ERP29-203ENST00000546477 1698 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC8P31273 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC8P31273 AC132872.2-201ENST00000581303 2368 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC8P31273 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC8P31273 HSPC324-201ENST00000411904 557 ntTSL 2 BASIC17.27■□□□□ 0.36
HOXC8P31273 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC8P31273 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC8P31273 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC17.27■□□□□ 0.36
HOXC8P31273 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.36
HOXC8P31273 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC8P31273 DUX4L45-201ENST00000566406 1057 ntBASIC17.27■□□□□ 0.36
HOXC8P31273 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC17.27■□□□□ 0.36
HOXC8P31273 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC17.27■□□□□ 0.36
HOXC8P31273 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HOXC8P31273 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC8P31273 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
HOXC8P31273 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.35
HOXC8P31273 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC8P31273 DAND5-202ENST00000585548 1731 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC8P31273 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC17.27■□□□□ 0.35
HOXC8P31273 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC8P31273 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HOXC8P31273 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 AD000864.1-201ENST00000624076 2295 ntBASIC17.26■□□□□ 0.35
HOXC8P31273 CA12-203ENST00000422263 2556 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC8P31273 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 ZBTB12BP-201ENST00000314232 1122 ntBASIC17.26■□□□□ 0.35
HOXC8P31273 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 PGGT1BP2-201ENST00000398621 1028 ntBASIC17.26■□□□□ 0.35
HOXC8P31273 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 AC026954.1-201ENST00000429771 1293 ntBASIC17.26■□□□□ 0.35
HOXC8P31273 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC8P31273 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HOXC8P31273 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC8P31273 AC079316.1-201ENST00000548397 411 ntBASIC17.26■□□□□ 0.35
HOXC8P31273 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC17.26■□□□□ 0.35
HOXC8P31273 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HOXC8P31273 KSR1-207ENST00000578981 748 ntTSL 4 BASIC17.26■□□□□ 0.35
HOXC8P31273 RHOXF1P1-202ENST00000635473 501 ntBASIC17.26■□□□□ 0.35
HOXC8P31273 AC008687.7-202ENST00000637404 953 ntBASIC17.26■□□□□ 0.35
HOXC8P31273 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC8P31273 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC17.26■□□□□ 0.35
HOXC8P31273 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HOXC8P31273 SP100-205ENST00000409824 1802 ntTSL 5 BASIC17.26■□□□□ 0.35
HOXC8P31273 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 PTP4A3-201ENST00000329397 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
HOXC8P31273 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXC8P31273 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC17.25■□□□□ 0.35
HOXC8P31273 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC8P31273 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
HOXC8P31273 POLR2I-201ENST00000221859 913 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 VAMP4-202ENST00000367740 1193 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HOXC8P31273 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC8P31273 FAM21FP-201ENST00000426241 1131 ntBASIC17.25■□□□□ 0.35
HOXC8P31273 AL592464.1-201ENST00000429389 429 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC8P31273 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 DMKN-216ENST00000458071 510 ntAPPRIS ALT2 TSL 3 BASIC17.25■□□□□ 0.35
HOXC8P31273 AC020659.2-202ENST00000512295 513 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC8P31273 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC17.25■□□□□ 0.35
HOXC8P31273 AC025279.2-201ENST00000569730 653 ntBASIC17.25■□□□□ 0.35
HOXC8P31273 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
HOXC8P31273 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
HOXC8P31273 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC17.25■□□□□ 0.35
HOXC8P31273 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
HOXC8P31273 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
HOXC8P31273 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC17.24■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms