Protein–RNA interactions for Protein: P25067

COL8A2, Collagen alpha-2(VIII) chain, humanhuman

Predictions only

Length 703 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A2P25067 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
COL8A2P25067 PIN1P1-201ENST00000412108 996 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC13.57□□□□□ -0.24
COL8A2P25067 SPTLC1P1-201ENST00000447199 261 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 SERBP1P3-201ENST00000459980 809 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC13.57□□□□□ -0.24
COL8A2P25067 TUBB3-203ENST00000553967 736 ntTSL 2 BASIC13.57□□□□□ -0.24
COL8A2P25067 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.57□□□□□ -0.24
COL8A2P25067 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 AF228730.6-201ENST00000641497 218 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 AC084121.3-201ENST00000641716 218 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 AC105233.6-201ENST00000642093 218 ntBASIC13.57□□□□□ -0.24
COL8A2P25067 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.57□□□□□ -0.24
COL8A2P25067 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
COL8A2P25067 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
COL8A2P25067 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
COL8A2P25067 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC13.57□□□□□ -0.24
COL8A2P25067 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC13.57□□□□□ -0.24
COL8A2P25067 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 C1QTNF6-202ENST00000397110 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
COL8A2P25067 OTUB1-206ENST00000535715 1391 ntTSL 5 BASIC13.57□□□□□ -0.24
COL8A2P25067 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 TPM1-201ENST00000267996 1670 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
COL8A2P25067 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 NMU-201ENST00000264218 816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 MRGPRF-202ENST00000320913 705 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 LRRC28-202ENST00000331450 752 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 GNAQP1-201ENST00000444815 1067 ntBASIC13.56□□□□□ -0.24
COL8A2P25067 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC13.56□□□□□ -0.24
COL8A2P25067 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.56□□□□□ -0.24
COL8A2P25067 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 TEX48-202ENST00000612244 662 ntTSL 3 BASIC13.56□□□□□ -0.24
COL8A2P25067 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 MIR6069-201ENST00000620069 79 ntBASIC13.56□□□□□ -0.24
COL8A2P25067 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 COQ8B-202ENST00000324464 2443 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 CYP4F24P-201ENST00000586049 1580 ntBASIC13.56□□□□□ -0.24
COL8A2P25067 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC13.56□□□□□ -0.24
COL8A2P25067 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 MED17-201ENST00000251871 5142 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC13.56□□□□□ -0.24
COL8A2P25067 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC13.56□□□□□ -0.24
COL8A2P25067 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
COL8A2P25067 AL691432.1-201ENST00000596308 1422 ntBASIC13.56□□□□□ -0.24
COL8A2P25067 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC13.55□□□□□ -0.24
COL8A2P25067 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
COL8A2P25067 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.55□□□□□ -0.24
COL8A2P25067 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
COL8A2P25067 MRPL13-201ENST00000306185 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
COL8A2P25067 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms