Protein–RNA interactions for Protein: P19338

NCL, Nucleolin, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLP19338 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NCLP19338 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 NUP98-203ENST00000359171 7023 ntTSL 5 BASIC19.24■□□□□ 0.67
NCLP19338 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC19.24■□□□□ 0.67
NCLP19338 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC19.24■□□□□ 0.67
NCLP19338 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC19.24■□□□□ 0.67
NCLP19338 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC19.24■□□□□ 0.67
NCLP19338 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 EGFR-206ENST00000454757 5464 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC19.24■□□□□ 0.67
NCLP19338 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 AC087163.2-201ENST00000457299 853 ntBASIC19.24■□□□□ 0.67
NCLP19338 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 AC116407.3-201ENST00000623905 1129 ntBASIC19.24■□□□□ 0.67
NCLP19338 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 RASD2-201ENST00000216127 3412 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
NCLP19338 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
NCLP19338 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
NCLP19338 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
NCLP19338 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC19.23■□□□□ 0.67
NCLP19338 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
NCLP19338 MAP3K12-201ENST00000267079 4319 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 PI4KAP1-204ENST00000612579 1703 ntBASIC19.23■□□□□ 0.67
NCLP19338 AC022532.1-201ENST00000624563 1728 ntBASIC19.23■□□□□ 0.67
NCLP19338 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 PCGF3-213ENST00000620529 1899 ntBASIC19.23■□□□□ 0.67
NCLP19338 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NCLP19338 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 OR7E14P-202ENST00000530490 1290 ntBASIC19.23■□□□□ 0.67
NCLP19338 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC19.23■□□□□ 0.67
NCLP19338 MTDHP4-201ENST00000600287 670 ntBASIC19.23■□□□□ 0.67
NCLP19338 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
NCLP19338 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC19.23■□□□□ 0.67
NCLP19338 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
NCLP19338 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC19.23■□□□□ 0.67
NCLP19338 NUP58-201ENST00000381718 2489 ntAPPRIS ALT1 TSL 2 BASIC19.23■□□□□ 0.67
NCLP19338 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 AC131009.4-201ENST00000624048 1740 ntBASIC19.22■□□□□ 0.67
NCLP19338 NUP88-207ENST00000573584 2916 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 ZNF30-202ENST00000439785 2651 ntAPPRIS P4 TSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC19.22■□□□□ 0.67
NCLP19338 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC19.22■□□□□ 0.67
NCLP19338 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
NCLP19338 MIR574-201ENST00000385209 96 ntBASIC19.22■□□□□ 0.67
NCLP19338 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC19.22■□□□□ 0.67
NCLP19338 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.22■□□□□ 0.67
NCLP19338 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC19.22■□□□□ 0.67
NCLP19338 PAWRP1-201ENST00000451083 565 ntBASIC19.22■□□□□ 0.67
NCLP19338 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC19.22■□□□□ 0.67
NCLP19338 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 MIR4492-201ENST00000581627 80 ntBASIC19.22■□□□□ 0.67
NCLP19338 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC19.22■□□□□ 0.67
NCLP19338 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.22■□□□□ 0.67
NCLP19338 AL589182.2-201ENST00000619332 1049 ntBASIC19.22■□□□□ 0.67
NCLP19338 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC19.22■□□□□ 0.67
NCLP19338 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 PPT1-215ENST00000641471 2368 ntBASIC19.22■□□□□ 0.67
NCLP19338 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 LINC02447-202ENST00000501888 2146 ntBASIC19.22■□□□□ 0.67
NCLP19338 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 CDH24-202ENST00000397359 3552 ntTSL 5 BASIC19.22■□□□□ 0.67
NCLP19338 C1orf43-201ENST00000350592 1610 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
NCLP19338 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC19.21■□□□□ 0.67
NCLP19338 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
NCLP19338 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.21■□□□□ 0.67
NCLP19338 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms