Protein–RNA interactions for Protein: P17600

SYN1, Synapsin-1, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYN1P17600 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 PTPN12-201ENST00000248594 3406 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 AC006480.2-201ENST00000609770 1337 ntBASIC17.27■□□□□ 0.36
SYN1P17600 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.27■□□□□ 0.36
SYN1P17600 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
SYN1P17600 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 GNG5-201ENST00000370641 920 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 FBXO44-203ENST00000376760 822 ntTSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 TXNRD3NB-202ENST00000383572 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 MPV17-205ENST00000402310 906 ntTSL 5 BASIC17.27■□□□□ 0.36
SYN1P17600 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 EVA1A-204ENST00000410071 777 ntAPPRIS P2 TSL 3 BASIC17.27■□□□□ 0.36
SYN1P17600 NKAIN1P1-201ENST00000435754 582 ntBASIC17.27■□□□□ 0.36
SYN1P17600 POM121L10P-201ENST00000436994 1285 ntBASIC17.27■□□□□ 0.36
SYN1P17600 EEF1DP4-201ENST00000446006 880 ntBASIC17.27■□□□□ 0.36
SYN1P17600 RN7SL11P-201ENST00000471305 293 ntBASIC17.27■□□□□ 0.36
SYN1P17600 SLED1-202ENST00000512051 380 ntBASIC17.27■□□□□ 0.36
SYN1P17600 SDHD-202ENST00000525291 790 ntTSL 3 BASIC17.27■□□□□ 0.36
SYN1P17600 AL136088.1-202ENST00000525871 439 ntTSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.27■□□□□ 0.36
SYN1P17600 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC17.27■□□□□ 0.36
SYN1P17600 AL133499.1-201ENST00000596207 608 ntBASIC17.27■□□□□ 0.36
SYN1P17600 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
SYN1P17600 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 HLA-C-210ENST00000640219 976 ntBASIC17.27■□□□□ 0.36
SYN1P17600 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.36
SYN1P17600 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.27■□□□□ 0.36
SYN1P17600 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYN1P17600 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
SYN1P17600 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYN1P17600 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SYN1P17600 SMARCE1-205ENST00000431889 1569 ntTSL 2 BASIC17.27■□□□□ 0.35
SYN1P17600 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SYN1P17600 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC17.27■□□□□ 0.35
SYN1P17600 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SYN1P17600 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
SYN1P17600 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
SYN1P17600 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
SYN1P17600 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 LETM1P2-201ENST00000597330 2178 ntBASIC17.26■□□□□ 0.35
SYN1P17600 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC17.26■□□□□ 0.35
SYN1P17600 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.26■□□□□ 0.35
SYN1P17600 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC17.26■□□□□ 0.35
SYN1P17600 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC17.26■□□□□ 0.35
SYN1P17600 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
SYN1P17600 KCNAB2-207ENST00000378111 822 ntTSL 3 BASIC17.26■□□□□ 0.35
SYN1P17600 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.26■□□□□ 0.35
SYN1P17600 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 AC044849.1-201ENST00000519737 1188 ntBASIC17.26■□□□□ 0.35
SYN1P17600 IQSEC3P1-201ENST00000538799 536 ntBASIC17.26■□□□□ 0.35
SYN1P17600 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 AQP8-202ENST00000566125 1276 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 RN7SL555P-201ENST00000584742 339 ntBASIC17.26■□□□□ 0.35
SYN1P17600 AC011495.3-201ENST00000596472 427 ntTSL 2 BASIC17.26■□□□□ 0.35
SYN1P17600 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC17.26■□□□□ 0.35
SYN1P17600 AC138649.2-201ENST00000615886 705 ntBASIC17.26■□□□□ 0.35
SYN1P17600 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
SYN1P17600 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 AL138709.1-201ENST00000614840 1693 ntBASIC17.26■□□□□ 0.35
SYN1P17600 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC17.26■□□□□ 0.35
SYN1P17600 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
SYN1P17600 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
SYN1P17600 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SYN1P17600 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
SYN1P17600 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 CROCCP2-202ENST00000412962 2773 ntBASIC17.25■□□□□ 0.35
SYN1P17600 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SYN1P17600 AADAT-208ENST00000515480 2193 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 TNFAIP2-201ENST00000333007 4175 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
SYN1P17600 P2RY4-201ENST00000374519 1595 ntAPPRIS P1 BASIC17.25■□□□□ 0.35
SYN1P17600 ATG10-202ENST00000355178 1438 ntTSL 2 BASIC17.25■□□□□ 0.35
SYN1P17600 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms