Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 AC005906.2-217ENST00000639573 1711 ntTSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 PHTF1-205ENST00000393357 3244 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
PDGFRAP16234 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
PDGFRAP16234 PTHLH-209ENST00000545234 1544 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
PDGFRAP16234 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFRAP16234 AC011477.6-201ENST00000604980 1927 ntBASIC16.86■□□□□ 0.29
PDGFRAP16234 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 CD83-201ENST00000379153 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PDGFRAP16234 PNMT-202ENST00000394246 821 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 SPDYE14P-201ENST00000442619 822 ntBASIC16.86■□□□□ 0.29
PDGFRAP16234 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC16.86■□□□□ 0.29
PDGFRAP16234 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 VPS29-207ENST00000549970 818 ntTSL 3 BASIC16.86■□□□□ 0.29
PDGFRAP16234 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFRAP16234 AC018529.1-201ENST00000613063 361 ntBASIC16.86■□□□□ 0.29
PDGFRAP16234 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 AP001059.3-201ENST00000619053 235 ntBASIC16.86■□□□□ 0.29
PDGFRAP16234 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFRAP16234 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 AL136982.4-201ENST00000437689 1740 ntBASIC16.86■□□□□ 0.29
PDGFRAP16234 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.86■□□□□ 0.29
PDGFRAP16234 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 TXNRD2-214ENST00000491939 2238 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
PDGFRAP16234 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC16.86■□□□□ 0.29
PDGFRAP16234 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PDGFRAP16234 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC16.86■□□□□ 0.29
PDGFRAP16234 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
PDGFRAP16234 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC16.85■□□□□ 0.29
PDGFRAP16234 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFRAP16234 PEX5-206ENST00000434354 2253 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC16.85■□□□□ 0.29
PDGFRAP16234 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC16.85■□□□□ 0.29
PDGFRAP16234 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFRAP16234 AL139010.1-201ENST00000454878 894 ntBASIC16.85■□□□□ 0.29
PDGFRAP16234 CYMP-203ENST00000474680 1263 ntBASIC16.85■□□□□ 0.29
PDGFRAP16234 IQSEC2-204ENST00000485377 835 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.85■□□□□ 0.29
PDGFRAP16234 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.85■□□□□ 0.29
PDGFRAP16234 AC026979.3-201ENST00000607315 403 ntBASIC16.85■□□□□ 0.29
PDGFRAP16234 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 ELFN1-202ENST00000561626 3742 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC16.85■□□□□ 0.29
PDGFRAP16234 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC16.85■□□□□ 0.29
PDGFRAP16234 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 BNIP3P1-202ENST00000550043 1585 ntBASIC16.85■□□□□ 0.29
PDGFRAP16234 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
PDGFRAP16234 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
PDGFRAP16234 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC16.84■□□□□ 0.29
PDGFRAP16234 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFRAP16234 ABR-203ENST00000536794 2213 ntTSL 2 BASIC16.84■□□□□ 0.29
PDGFRAP16234 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.84■□□□□ 0.29
PDGFRAP16234 ARHGAP26-202ENST00000378004 9200 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PDGFRAP16234 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 75.2 ms