Protein–RNA interactions for Protein: P09603

CSF1, Macrophage colony-stimulating factor 1, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1P09603 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CSF1P09603 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC13.98□□□□□ -0.17
CSF1P09603 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 LINC01101-201ENST00000622953 1884 ntBASIC13.98□□□□□ -0.17
CSF1P09603 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 FABP5-202ENST00000396359 986 ntTSL 5 BASIC13.98□□□□□ -0.17
CSF1P09603 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC13.98□□□□□ -0.17
CSF1P09603 SPDYE21P-201ENST00000413323 827 ntBASIC13.98□□□□□ -0.17
CSF1P09603 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC13.98□□□□□ -0.17
CSF1P09603 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC13.98□□□□□ -0.17
CSF1P09603 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CSF1P09603 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC13.98□□□□□ -0.17
CSF1P09603 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC13.98□□□□□ -0.17
CSF1P09603 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.98□□□□□ -0.17
CSF1P09603 PIN1-206ENST00000587625 878 ntTSL 2 BASIC13.98□□□□□ -0.17
CSF1P09603 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC13.98□□□□□ -0.17
CSF1P09603 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.98□□□□□ -0.17
CSF1P09603 AC020765.3-201ENST00000613051 740 ntBASIC13.98□□□□□ -0.17
CSF1P09603 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC13.98□□□□□ -0.17
CSF1P09603 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CSF1P09603 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC13.98□□□□□ -0.17
CSF1P09603 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC13.98□□□□□ -0.17
CSF1P09603 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CSF1P09603 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC13.98□□□□□ -0.17
CSF1P09603 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC13.98□□□□□ -0.17
CSF1P09603 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CSF1P09603 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC13.97□□□□□ -0.17
CSF1P09603 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 MTA2-201ENST00000278823 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 AL592424.1-201ENST00000563624 1536 ntBASIC13.97□□□□□ -0.17
CSF1P09603 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 RGPD5-202ENST00000272454 2907 ntTSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
CSF1P09603 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC13.97□□□□□ -0.17
CSF1P09603 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC13.97□□□□□ -0.17
CSF1P09603 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC13.97□□□□□ -0.17
CSF1P09603 MIR7706-201ENST00000613747 67 ntBASIC13.97□□□□□ -0.17
CSF1P09603 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC13.97□□□□□ -0.17
CSF1P09603 FAM215A-202ENST00000632077 792 ntBASIC13.97□□□□□ -0.17
CSF1P09603 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.97□□□□□ -0.17
CSF1P09603 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 LOX-206ENST00000639739 1626 ntTSL 5 BASIC13.97□□□□□ -0.17
CSF1P09603 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
CSF1P09603 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSF1P09603 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
CSF1P09603 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSF1P09603 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSF1P09603 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSF1P09603 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSF1P09603 AL590787.1-201ENST00000568856 1315 ntBASIC13.96□□□□□ -0.17
CSF1P09603 SDCBP2-202ENST00000360779 1519 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSF1P09603 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
CSF1P09603 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms