Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 FAM86C2P-203ENST00000528684 1004 ntBASIC15.89■□□□□ 0.13
CAPN1P07384 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC15.89■□□□□ 0.13
CAPN1P07384 AC243562.1-201ENST00000560672 389 ntBASIC15.89■□□□□ 0.13
CAPN1P07384 INO80E-210ENST00000567705 880 ntTSL 3 BASIC15.89■□□□□ 0.13
CAPN1P07384 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC15.89■□□□□ 0.13
CAPN1P07384 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC15.89■□□□□ 0.13
CAPN1P07384 ORC5-208ENST00000626700 344 ntTSL 3 BASIC15.89■□□□□ 0.13
CAPN1P07384 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC15.89■□□□□ 0.13
CAPN1P07384 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 AC112504.1-201ENST00000623415 1841 ntBASIC15.89■□□□□ 0.13
CAPN1P07384 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
CAPN1P07384 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.89■□□□□ 0.13
CAPN1P07384 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.89■□□□□ 0.13
CAPN1P07384 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 AC141586.1-201ENST00000399702 2748 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CAPN1P07384 U82695.1-201ENST00000635752 1889 ntBASIC15.88■□□□□ 0.13
CAPN1P07384 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 BECN1-213ENST00000590099 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
CAPN1P07384 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 MIR648-201ENST00000385046 94 ntBASIC15.88■□□□□ 0.13
CAPN1P07384 PNMT-202ENST00000394246 821 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPN1P07384 TFAMP1-201ENST00000412727 736 ntBASIC15.88■□□□□ 0.13
CAPN1P07384 VMO1-203ENST00000416307 712 ntTSL 2 BASIC15.88■□□□□ 0.13
CAPN1P07384 AL627223.1-201ENST00000416693 442 ntBASIC15.88■□□□□ 0.13
CAPN1P07384 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC15.88■□□□□ 0.13
CAPN1P07384 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC15.88■□□□□ 0.13
CAPN1P07384 AL009183.1-201ENST00000603760 355 ntBASIC15.88■□□□□ 0.13
CAPN1P07384 AC106028.4-201ENST00000614509 607 ntBASIC15.88■□□□□ 0.13
CAPN1P07384 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 NR4A3-202ENST00000338488 2588 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC15.88■□□□□ 0.13
CAPN1P07384 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 AC069224.1-201ENST00000566372 1715 ntBASIC15.88■□□□□ 0.13
CAPN1P07384 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
CAPN1P07384 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN1P07384 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN1P07384 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 PRAL-201ENST00000624952 3286 ntBASIC15.87■□□□□ 0.13
CAPN1P07384 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 VILL-207ENST00000465644 1857 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CAPN1P07384 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC15.87■□□□□ 0.13
CAPN1P07384 HHATL-AS1-201ENST00000423165 557 ntTSL 4 BASIC15.87■□□□□ 0.13
CAPN1P07384 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC15.87■□□□□ 0.13
CAPN1P07384 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC15.87■□□□□ 0.13
CAPN1P07384 SPDYE11-202ENST00000450699 704 ntBASIC15.87■□□□□ 0.13
CAPN1P07384 AC079140.1-201ENST00000508039 487 ntBASIC15.87■□□□□ 0.13
CAPN1P07384 DAD1-205ENST00000543337 501 ntTSL 3 BASIC15.87■□□□□ 0.13
CAPN1P07384 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC15.87■□□□□ 0.13
CAPN1P07384 SPDYE9P-201ENST00000570642 692 ntBASIC15.87■□□□□ 0.13
CAPN1P07384 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 SPDYE10P-202ENST00000612005 668 ntBASIC15.87■□□□□ 0.13
CAPN1P07384 SPDYE8P-202ENST00000612377 668 ntBASIC15.87■□□□□ 0.13
CAPN1P07384 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
CAPN1P07384 SALL3-206ENST00000616649 2958 ntTSL 5 BASIC15.87■□□□□ 0.13
CAPN1P07384 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 AC009093.7-201ENST00000623853 1223 ntBASIC15.87■□□□□ 0.13
CAPN1P07384 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
CAPN1P07384 AP005117.1-202ENST00000581724 1908 ntBASIC15.87■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 49.3 ms