Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.31■□□□□ 0.68
APPP05067 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC19.31■□□□□ 0.68
APPP05067 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC19.31■□□□□ 0.68
APPP05067 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC19.31■□□□□ 0.68
APPP05067 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC19.31■□□□□ 0.68
APPP05067 PHF8-203ENST00000338946 4651 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
APPP05067 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 AL136982.4-201ENST00000437689 1740 ntBASIC19.31■□□□□ 0.68
APPP05067 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
APPP05067 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC19.3■□□□□ 0.68
APPP05067 TNFSF8-203ENST00000618336 1523 ntTSL 3 BASIC19.3■□□□□ 0.68
APPP05067 NAP1L4-201ENST00000380542 2511 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
APPP05067 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
APPP05067 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.3■□□□□ 0.68
APPP05067 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC19.3■□□□□ 0.68
APPP05067 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC19.3■□□□□ 0.68
APPP05067 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.3■□□□□ 0.68
APPP05067 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC19.3■□□□□ 0.68
APPP05067 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.3■□□□□ 0.68
APPP05067 AL158211.3-201ENST00000607385 239 ntBASIC19.3■□□□□ 0.68
APPP05067 AL133215.2-201ENST00000609242 977 ntBASIC19.3■□□□□ 0.68
APPP05067 AL138828.2-201ENST00000615812 383 ntBASIC19.3■□□□□ 0.68
APPP05067 SPDYE12P-201ENST00000618416 771 ntBASIC19.3■□□□□ 0.68
APPP05067 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
APPP05067 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC19.3■□□□□ 0.68
APPP05067 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
APPP05067 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC19.3■□□□□ 0.68
APPP05067 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC19.3■□□□□ 0.68
APPP05067 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 MBD1-204ENST00000347968 3091 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
APPP05067 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC19.3■□□□□ 0.68
APPP05067 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
APPP05067 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC19.29■□□□□ 0.68
APPP05067 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 PRKAG1-217ENST00000552212 1497 ntTSL 2 BASIC19.29■□□□□ 0.68
APPP05067 CXXC1-201ENST00000285106 2936 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC19.29■□□□□ 0.68
APPP05067 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.29■□□□□ 0.68
APPP05067 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 AC092580.3-201ENST00000430932 139 ntBASIC19.29■□□□□ 0.68
APPP05067 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
APPP05067 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC19.29■□□□□ 0.68
APPP05067 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.29■□□□□ 0.68
APPP05067 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.29■□□□□ 0.68
APPP05067 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
APPP05067 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
APPP05067 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC19.29■□□□□ 0.68
APPP05067 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 CXCL14-202ENST00000512158 1760 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
APPP05067 UNC5D-203ENST00000416672 3532 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
APPP05067 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC19.28■□□□□ 0.68
APPP05067 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
APPP05067 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC19.28■□□□□ 0.68
APPP05067 FAM227A-201ENST00000355830 2417 ntAPPRIS P5 TSL 5 BASIC19.28■□□□□ 0.68
APPP05067 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 HRCT1-201ENST00000354323 950 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
APPP05067 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.28■□□□□ 0.68
APPP05067 RPL37AP1-201ENST00000412502 279 ntBASIC19.28■□□□□ 0.68
APPP05067 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC19.28■□□□□ 0.68
APPP05067 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC19.28■□□□□ 0.68
APPP05067 AL121753.1-201ENST00000444717 529 ntAPPRIS P1 TSL 3 BASIC19.28■□□□□ 0.68
APPP05067 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.28■□□□□ 0.68
APPP05067 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC19.28■□□□□ 0.68
APPP05067 AL079307.3-201ENST00000556114 283 ntBASIC19.28■□□□□ 0.68
APPP05067 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC19.28■□□□□ 0.68
APPP05067 NDRG4-247ENST00000568640 1281 ntTSL 2 BASIC19.28■□□□□ 0.68
APPP05067 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
APPP05067 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.28■□□□□ 0.68
APPP05067 NCAPH2-205ENST00000420993 2037 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC19.28■□□□□ 0.68
APPP05067 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 USP27X-201ENST00000621775 2618 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
APPP05067 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
APPP05067 FRMD6-AS1-201ENST00000617151 2229 ntBASIC19.28■□□□□ 0.68
APPP05067 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms