Protein–RNA interactions for Protein: O95477

ABCA1, ATP-binding cassette sub-family A member 1, humanhuman

Predictions only

Length 2,261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA1O95477 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 COX11-210ENST00000639671 696 ntBASIC13.51□□□□□ -0.25
ABCA1O95477 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
ABCA1O95477 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.51□□□□□ -0.25
ABCA1O95477 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 GSK3B-201ENST00000264235 7711 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCA1O95477 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCA1O95477 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCA1O95477 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC13.51□□□□□ -0.25
ABCA1O95477 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC13.51□□□□□ -0.25
ABCA1O95477 SRD5A3P1-201ENST00000603021 949 ntBASIC13.51□□□□□ -0.25
ABCA1O95477 AC099568.2-201ENST00000609194 695 ntBASIC13.51□□□□□ -0.25
ABCA1O95477 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 MCF2L2-208ENST00000473233 4748 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
ABCA1O95477 SH3BP4-201ENST00000344528 5044 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
ABCA1O95477 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ABCA1O95477 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 HDHD3-202ENST00000374180 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
ABCA1O95477 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 AC022210.1-201ENST00000449856 793 ntBASIC13.5□□□□□ -0.25
ABCA1O95477 SERF1A-205ENST00000507348 663 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC13.5□□□□□ -0.25
ABCA1O95477 NDUFB1-207ENST00000617122 417 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 PCDHB17P-201ENST00000539533 2393 ntBASIC13.5□□□□□ -0.25
ABCA1O95477 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 PTGES3-202ENST00000414274 1547 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC13.5□□□□□ -0.25
ABCA1O95477 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 MRPS30-202ENST00000507110 1678 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 ARPC1B-211ENST00000451682 1715 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC13.5□□□□□ -0.25
ABCA1O95477 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC13.5□□□□□ -0.25
ABCA1O95477 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
ABCA1O95477 RPL28-204ENST00000431533 590 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 CD81-207ENST00000481687 890 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC13.5□□□□□ -0.25
ABCA1O95477 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.5□□□□□ -0.25
ABCA1O95477 TMEM170A-203ENST00000566980 547 ntTSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 ORC6-206ENST00000568364 888 ntTSL 5 BASIC13.5□□□□□ -0.25
ABCA1O95477 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 FHL2-212ENST00000607522 759 ntTSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
ABCA1O95477 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC13.49□□□□□ -0.25
ABCA1O95477 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.49□□□□□ -0.25
ABCA1O95477 CLDN14-201ENST00000342108 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.49□□□□□ -0.25
ABCA1O95477 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC13.49□□□□□ -0.25
ABCA1O95477 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC13.49□□□□□ -0.25
ABCA1O95477 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
ABCA1O95477 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 43.9 ms