Protein–RNA interactions for Protein: O76039

CDKL5, Cyclin-dependent kinase-like 5, humanhuman

Predictions only

Length 1,030 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL5O76039 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL5O76039 RBPMS2P1-201ENST00000437762 623 ntBASIC18.67■□□□□ 0.58
CDKL5O76039 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL5O76039 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL5O76039 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC18.67■□□□□ 0.58
CDKL5O76039 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL5O76039 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC18.67■□□□□ 0.58
CDKL5O76039 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 SIK3-201ENST00000375300 6213 ntAPPRIS P3 TSL 2 BASIC18.67■□□□□ 0.58
CDKL5O76039 CTIF-201ENST00000256413 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 CYP4F24P-201ENST00000586049 1580 ntBASIC18.67■□□□□ 0.58
CDKL5O76039 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL5O76039 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC18.67■□□□□ 0.58
CDKL5O76039 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CDKL5O76039 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 TNKS1BP1-201ENST00000358252 5795 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 SNCAIP-202ENST00000261368 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CDKL5O76039 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 NDUFB2-202ENST00000460088 420 ntTSL 3 BASIC18.66■□□□□ 0.58
CDKL5O76039 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC18.66■□□□□ 0.58
CDKL5O76039 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CDKL5O76039 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CDKL5O76039 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.66■□□□□ 0.58
CDKL5O76039 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 REXO1L1P-202ENST00000608646 1974 ntBASIC18.65■□□□□ 0.58
CDKL5O76039 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.65■□□□□ 0.58
CDKL5O76039 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.65■□□□□ 0.58
CDKL5O76039 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 RPL30-202ENST00000396070 440 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 CNN2P11-201ENST00000429351 262 ntBASIC18.65■□□□□ 0.58
CDKL5O76039 GPS2P2-201ENST00000430745 888 ntBASIC18.65■□□□□ 0.58
CDKL5O76039 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.65■□□□□ 0.58
CDKL5O76039 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC18.65■□□□□ 0.58
CDKL5O76039 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
CDKL5O76039 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CDKL5O76039 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 FYCO1-205ENST00000535325 8578 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CDKL5O76039 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC18.65■□□□□ 0.58
CDKL5O76039 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC18.65■□□□□ 0.58
CDKL5O76039 ARVCF-204ENST00000406522 2682 ntTSL 5 BASIC18.65■□□□□ 0.58
CDKL5O76039 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.65■□□□□ 0.58
CDKL5O76039 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CDKL5O76039 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CDKL5O76039 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CDKL5O76039 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CDKL5O76039 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC18.64■□□□□ 0.57
CDKL5O76039 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.64■□□□□ 0.57
CDKL5O76039 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms