Protein–RNA interactions for Protein: O75340

PDCD6, Programmed cell death protein 6, humanhuman

Predictions only

Length 191 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6O75340 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC13.6□□□□□ -0.23
PDCD6O75340 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PDCD6O75340 TMED7-TICAM2-202ENST00000333314 3453 ntTSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC13.6□□□□□ -0.23
PDCD6O75340 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 AL160408.2-201ENST00000436039 693 ntTSL 3 BASIC13.6□□□□□ -0.23
PDCD6O75340 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC13.6□□□□□ -0.23
PDCD6O75340 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC13.6□□□□□ -0.23
PDCD6O75340 RNA5SP419-201ENST00000515908 135 ntBASIC13.6□□□□□ -0.23
PDCD6O75340 LDLRAD2-203ENST00000543870 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 CD63-204ENST00000546939 779 ntTSL 3 BASIC13.6□□□□□ -0.23
PDCD6O75340 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC13.6□□□□□ -0.23
PDCD6O75340 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 GRID2IP-201ENST00000435185 3215 ntTSL 5 BASIC13.6□□□□□ -0.23
PDCD6O75340 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.6□□□□□ -0.23
PDCD6O75340 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
PDCD6O75340 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
PDCD6O75340 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 PLXNB1-202ENST00000358536 7308 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 FAM227B-201ENST00000299338 2008 ntAPPRIS P3 TSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 FAM60A-203ENST00000454658 1555 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 AC025580.3-201ENST00000617932 1424 ntBASIC13.59□□□□□ -0.23
PDCD6O75340 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
PDCD6O75340 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 CRCP-205ENST00000431089 942 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 AL662844.1-201ENST00000546340 181 ntBASIC13.59□□□□□ -0.23
PDCD6O75340 AC004877.2-201ENST00000623941 599 ntBASIC13.59□□□□□ -0.23
PDCD6O75340 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 APBA2-205ENST00000558330 3349 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 AC134407.2-201ENST00000625089 1978 ntBASIC13.59□□□□□ -0.23
PDCD6O75340 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.59□□□□□ -0.23
PDCD6O75340 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
PDCD6O75340 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC13.59□□□□□ -0.23
PDCD6O75340 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDCD6O75340 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDCD6O75340 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDCD6O75340 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PDCD6O75340 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
PDCD6O75340 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.23
PDCD6O75340 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDCD6O75340 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC13.58□□□□□ -0.23
PDCD6O75340 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PDCD6O75340 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC13.58□□□□□ -0.23
PDCD6O75340 PGBD2-201ENST00000329291 2136 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
PDCD6O75340 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
PDCD6O75340 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
PDCD6O75340 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDCD6O75340 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.58□□□□□ -0.24
PDCD6O75340 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
PDCD6O75340 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.58□□□□□ -0.24
PDCD6O75340 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDCD6O75340 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
PDCD6O75340 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 63.3 ms