Protein–RNA interactions for Protein: O43543

XRCC2, DNA repair protein XRCC2, humanhuman

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC2O43543 PAX6-203ENST00000379109 3182 ntAPPRIS ALT1 TSL 2 BASIC14.03□□□□□ -0.16
XRCC2O43543 PLPPR5-201ENST00000263177 3288 ntAPPRIS P4 TSL 1 (best) BASIC14.03□□□□□ -0.16
XRCC2O43543 ING5-213ENST00000636051 4199 ntTSL 5 BASIC14.03□□□□□ -0.16
XRCC2O43543 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
XRCC2O43543 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
XRCC2O43543 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.02□□□□□ -0.16
XRCC2O43543 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
XRCC2O43543 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.02□□□□□ -0.16
XRCC2O43543 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC14.02□□□□□ -0.16
XRCC2O43543 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 MST1L-201ENST00000442552 2185 ntBASIC14.02□□□□□ -0.16
XRCC2O43543 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC14.02□□□□□ -0.16
XRCC2O43543 KRT35-201ENST00000246639 1778 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
XRCC2O43543 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC14.02□□□□□ -0.16
XRCC2O43543 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
XRCC2O43543 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC14.02□□□□□ -0.16
XRCC2O43543 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC14.02□□□□□ -0.17
XRCC2O43543 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC14.02□□□□□ -0.17
XRCC2O43543 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 HRAS-204ENST00000417302 1233 ntTSL 5 BASIC14.02□□□□□ -0.17
XRCC2O43543 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
XRCC2O43543 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC14.02□□□□□ -0.17
XRCC2O43543 POLD2P1-201ENST00000511220 997 ntBASIC14.02□□□□□ -0.17
XRCC2O43543 PGAM5P1-201ENST00000518923 814 ntBASIC14.02□□□□□ -0.17
XRCC2O43543 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC14.02□□□□□ -0.17
XRCC2O43543 ABHD17A-204ENST00000590661 1079 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 NKG7-205ENST00000600427 520 ntTSL 3 BASIC14.02□□□□□ -0.17
XRCC2O43543 AC090241.2-202ENST00000602333 633 ntTSL 3 BASIC14.02□□□□□ -0.17
XRCC2O43543 NBEAL2-205ENST00000450053 8827 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
XRCC2O43543 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 AC144831.1-201ENST00000573312 2656 ntBASIC14.02□□□□□ -0.17
XRCC2O43543 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC14.02□□□□□ -0.17
XRCC2O43543 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
XRCC2O43543 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
XRCC2O43543 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC14.02□□□□□ -0.17
XRCC2O43543 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 TONSL-203ENST00000613741 1713 ntTSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 OASL-204ENST00000620239 1695 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 CD14-202ENST00000401743 1648 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
XRCC2O43543 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 TMEM220-202ENST00000455996 1402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC14.01□□□□□ -0.17
XRCC2O43543 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC14.01□□□□□ -0.17
XRCC2O43543 ADH5P3-201ENST00000433842 1137 ntBASIC14.01□□□□□ -0.17
XRCC2O43543 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC14.01□□□□□ -0.17
XRCC2O43543 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.01□□□□□ -0.17
XRCC2O43543 GATB-205ENST00000508611 605 ntTSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC14.01□□□□□ -0.17
XRCC2O43543 KRT8P23-201ENST00000560090 1207 ntBASIC14.01□□□□□ -0.17
XRCC2O43543 INO80E-210ENST00000567705 880 ntTSL 3 BASIC14.01□□□□□ -0.17
XRCC2O43543 AL138918.1-201ENST00000568306 659 ntBASIC14.01□□□□□ -0.17
XRCC2O43543 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC14.01□□□□□ -0.17
XRCC2O43543 RBPMS-204ENST00000397323 2941 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 GOLGA2P9-201ENST00000596977 1937 ntBASIC14.01□□□□□ -0.17
XRCC2O43543 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.01□□□□□ -0.17
XRCC2O43543 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
XRCC2O43543 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC14.01□□□□□ -0.17
XRCC2O43543 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14□□□□□ -0.17
XRCC2O43543 WDR70-202ENST00000504564 1526 ntTSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
XRCC2O43543 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
XRCC2O43543 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms