Protein–RNA interactions for Protein: O43312

MTSS1, Metastasis suppressor protein 1, humanhuman

Predictions only

Length 755 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MTSS1O43312 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.43■□□□□ 0.22
MTSS1O43312 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC16.43■□□□□ 0.22
MTSS1O43312 AL356481.3-201ENST00000630523 575 ntTSL 5 BASIC16.43■□□□□ 0.22
MTSS1O43312 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.43■□□□□ 0.22
MTSS1O43312 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC16.43■□□□□ 0.22
MTSS1O43312 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
MTSS1O43312 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MTSS1O43312 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MTSS1O43312 YTHDF2-209ENST00000542507 2825 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
MTSS1O43312 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MTSS1O43312 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC16.43■□□□□ 0.22
MTSS1O43312 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MTSS1O43312 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MTSS1O43312 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.43■□□□□ 0.22
MTSS1O43312 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
MTSS1O43312 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC16.42■□□□□ 0.22
MTSS1O43312 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.42■□□□□ 0.22
MTSS1O43312 NUCKS1-201ENST00000367142 6496 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 ACOX3-203ENST00000503233 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 AL596257.1-201ENST00000641463 2694 ntBASIC16.42■□□□□ 0.22
MTSS1O43312 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
MTSS1O43312 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 KRT18P32-201ENST00000424695 1287 ntBASIC16.42■□□□□ 0.22
MTSS1O43312 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC16.42■□□□□ 0.22
MTSS1O43312 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC16.42■□□□□ 0.22
MTSS1O43312 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MTSS1O43312 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC16.42■□□□□ 0.22
MTSS1O43312 STAT5B-201ENST00000293328 5103 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 PHACTR3-204ENST00000371015 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.42■□□□□ 0.22
MTSS1O43312 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
MTSS1O43312 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
MTSS1O43312 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
MTSS1O43312 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 MYZAP-202ENST00000380565 2181 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 PCDH1-203ENST00000394536 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 AC026412.1-203ENST00000507841 2338 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 AL627223.1-201ENST00000416693 442 ntBASIC16.41■□□□□ 0.22
MTSS1O43312 AL353705.2-201ENST00000428243 662 ntBASIC16.41■□□□□ 0.22
MTSS1O43312 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 PTGES3-204ENST00000448157 1017 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC16.41■□□□□ 0.22
MTSS1O43312 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 MDH2-205ENST00000461263 648 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.41■□□□□ 0.22
MTSS1O43312 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC16.41■□□□□ 0.22
MTSS1O43312 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC16.41■□□□□ 0.22
MTSS1O43312 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC16.41■□□□□ 0.22
MTSS1O43312 AC004835.2-201ENST00000603762 682 ntBASIC16.41■□□□□ 0.22
MTSS1O43312 AL157832.3-201ENST00000635764 1005 ntTSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 BNIP3P1-202ENST00000550043 1585 ntBASIC16.41■□□□□ 0.22
MTSS1O43312 CICP6-201ENST00000457191 2729 ntBASIC16.41■□□□□ 0.22
MTSS1O43312 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 ERICH5-201ENST00000318528 1761 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 ADAM9-206ENST00000481513 2387 ntTSL 2 BASIC16.41■□□□□ 0.22
MTSS1O43312 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MTSS1O43312 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
MTSS1O43312 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
MTSS1O43312 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms