Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 PROK2-201ENST00000295619 1022 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CUX2O14529 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC26.86■■□□□ 1.89
CUX2O14529 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC26.86■■□□□ 1.89
CUX2O14529 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC26.86■■□□□ 1.89
CUX2O14529 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC26.86■■□□□ 1.89
CUX2O14529 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC26.86■■□□□ 1.89
CUX2O14529 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CUX2O14529 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CUX2O14529 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC26.85■■□□□ 1.89
CUX2O14529 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CUX2O14529 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC26.85■■□□□ 1.89
CUX2O14529 REEP5-205ENST00000504247 480 ntTSL 5 BASIC26.85■■□□□ 1.89
CUX2O14529 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 VDAC3-211ENST00000522572 799 ntTSL 5 BASIC26.85■■□□□ 1.89
CUX2O14529 NCK2-206ENST00000522586 490 ntTSL 5 BASIC26.85■■□□□ 1.89
CUX2O14529 RTN3P1-201ENST00000536295 711 ntBASIC26.85■■□□□ 1.89
CUX2O14529 TMEM208-207ENST00000563953 887 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC26.85■■□□□ 1.89
CUX2O14529 AC242376.2-201ENST00000619355 883 ntBASIC26.85■■□□□ 1.89
CUX2O14529 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC26.85■■□□□ 1.89
CUX2O14529 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC26.85■■□□□ 1.89
CUX2O14529 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC26.85■■□□□ 1.89
CUX2O14529 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CUX2O14529 Z84468.1-201ENST00000626321 1408 ntTSL 1 (best) BASIC26.85■■□□□ 1.89
CUX2O14529 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC26.85■■□□□ 1.89
CUX2O14529 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC26.84■■□□□ 1.89
CUX2O14529 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 RAC2-202ENST00000401529 569 ntTSL 4 BASIC26.84■■□□□ 1.89
CUX2O14529 CMC1-204ENST00000423894 549 ntTSL 2 BASIC26.84■■□□□ 1.89
CUX2O14529 AL356056.1-201ENST00000437899 369 ntTSL 5 BASIC26.84■■□□□ 1.89
CUX2O14529 DERL3-208ENST00000476077 969 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 FABP5P3-202ENST00000477993 1027 ntTSL 5 BASIC26.84■■□□□ 1.89
CUX2O14529 PDCD6-202ENST00000505221 672 ntTSL 3 BASIC26.84■■□□□ 1.89
CUX2O14529 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC26.84■■□□□ 1.89
CUX2O14529 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC26.84■■□□□ 1.89
CUX2O14529 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC26.84■■□□□ 1.89
CUX2O14529 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC26.84■■□□□ 1.89
CUX2O14529 U82695.1-201ENST00000635752 1889 ntBASIC26.84■■□□□ 1.89
CUX2O14529 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC26.84■■□□□ 1.89
CUX2O14529 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC26.84■■□□□ 1.89
CUX2O14529 AC060834.1-201ENST00000443027 2032 ntBASIC26.84■■□□□ 1.89
CUX2O14529 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC26.84■■□□□ 1.89
CUX2O14529 KCNJ2-AS1-201ENST00000590966 2442 ntBASIC26.84■■□□□ 1.89
CUX2O14529 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CUX2O14529 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC26.84■■□□□ 1.89
CUX2O14529 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC26.84■■□□□ 1.89
CUX2O14529 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC26.83■■□□□ 1.89
CUX2O14529 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC26.83■■□□□ 1.89
CUX2O14529 RAMP3-201ENST00000242249 1323 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 PCGF3-213ENST00000620529 1899 ntBASIC26.83■■□□□ 1.89
CUX2O14529 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CUX2O14529 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC26.83■■□□□ 1.89
CUX2O14529 SPACA3-201ENST00000269053 817 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC26.83■■□□□ 1.89
CUX2O14529 KCNQ1DN-201ENST00000441418 1093 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 BUD31-205ENST00000456893 512 ntTSL 5 BASIC26.83■■□□□ 1.89
CUX2O14529 FAM104A-204ENST00000580032 451 ntTSL 3 BASIC26.83■■□□□ 1.89
CUX2O14529 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC26.83■■□□□ 1.89
CUX2O14529 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC26.83■■□□□ 1.89
CUX2O14529 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC26.83■■□□□ 1.89
CUX2O14529 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC26.83■■□□□ 1.89
CUX2O14529 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 AL603756.1-201ENST00000606511 2163 ntBASIC26.83■■□□□ 1.89
CUX2O14529 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC26.83■■□□□ 1.89
CUX2O14529 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC26.83■■□□□ 1.89
CUX2O14529 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC26.83■■□□□ 1.89
CUX2O14529 ATP6V0E2-207ENST00000479613 1666 ntTSL 2 BASIC26.83■■□□□ 1.88
CUX2O14529 SCAF11-203ENST00000395453 1336 ntAPPRIS ALT2 TSL 2 BASIC26.83■■□□□ 1.88
CUX2O14529 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC26.82■■□□□ 1.88
CUX2O14529 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CUX2O14529 RPS9-201ENST00000302907 829 ntAPPRIS P1 TSL 1 (best) BASIC26.82■■□□□ 1.88
CUX2O14529 GAD1-201ENST00000344257 1029 ntTSL 5 BASIC26.82■■□□□ 1.88
CUX2O14529 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC26.82■■□□□ 1.88
CUX2O14529 AL133267.1-201ENST00000398220 340 ntBASIC26.82■■□□□ 1.88
CUX2O14529 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC26.82■■□□□ 1.88
CUX2O14529 USP40-206ENST00000443711 628 ntTSL 2 BASIC26.82■■□□□ 1.88
CUX2O14529 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC26.82■■□□□ 1.88
CUX2O14529 AC104333.4-201ENST00000632866 554 ntTSL 3 BASIC26.82■■□□□ 1.88
CUX2O14529 PRSS30P-206ENST00000641773 873 ntBASIC26.82■■□□□ 1.88
CUX2O14529 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC26.82■■□□□ 1.88
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms