Protein–RNA interactions for Protein: O00570

SOX1, Transcription factor SOX-1, humanhuman

Predicted RBP Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1O00570 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SOX1O00570 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC16.83■□□□□ 0.29
SOX1O00570 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
SOX1O00570 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SOX1O00570 NPAS3-202ENST00000356141 2802 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 CMTM5-203ENST00000359320 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 PRPF38B-202ENST00000370022 1591 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.28
SOX1O00570 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
SOX1O00570 EEF1B2-202ENST00000392221 880 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SOX1O00570 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.83■□□□□ 0.28
SOX1O00570 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC16.83■□□□□ 0.28
SOX1O00570 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC16.83■□□□□ 0.28
SOX1O00570 AL020996.1-201ENST00000442055 435 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX1O00570 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX1O00570 CLDN11-207ENST00000486975 1139 ntTSL 2 BASIC16.83■□□□□ 0.28
SOX1O00570 AC133963.1-201ENST00000504166 1679 ntBASIC16.83■□□□□ 0.28
SOX1O00570 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX1O00570 ALG1L13P-202ENST00000519320 584 ntBASIC16.83■□□□□ 0.28
SOX1O00570 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 DNM1P51-201ENST00000558149 522 ntBASIC16.83■□□□□ 0.28
SOX1O00570 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX1O00570 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC16.83■□□□□ 0.28
SOX1O00570 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.83■□□□□ 0.28
SOX1O00570 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX1O00570 RN7SL713P-201ENST00000582127 302 ntBASIC16.83■□□□□ 0.28
SOX1O00570 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 AC093813.1-201ENST00000605066 256 ntBASIC16.83■□□□□ 0.28
SOX1O00570 AC107373.2-201ENST00000607735 490 ntBASIC16.83■□□□□ 0.28
SOX1O00570 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.83■□□□□ 0.28
SOX1O00570 RIBC2-202ENST00000614167 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SOX1O00570 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 AC012317.2-201ENST00000623305 2251 ntBASIC16.83■□□□□ 0.28
SOX1O00570 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SOX1O00570 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
SOX1O00570 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SOX1O00570 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.82■□□□□ 0.28
SOX1O00570 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC16.82■□□□□ 0.28
SOX1O00570 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
SOX1O00570 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SOX1O00570 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC16.82■□□□□ 0.28
SOX1O00570 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.82■□□□□ 0.28
SOX1O00570 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 AC104581.1-202ENST00000635932 2618 ntBASIC16.82■□□□□ 0.28
SOX1O00570 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 NDUFAB1P1-201ENST00000404262 460 ntBASIC16.82■□□□□ 0.28
SOX1O00570 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 NUBP1-202ENST00000433392 1185 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 PIN4P1-201ENST00000451079 396 ntBASIC16.82■□□□□ 0.28
SOX1O00570 TP53AIP1-201ENST00000458238 777 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 NSD1-211ENST00000511258 809 ntTSL 3 BASIC16.82■□□□□ 0.28
SOX1O00570 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.82■□□□□ 0.28
SOX1O00570 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC16.82■□□□□ 0.28
SOX1O00570 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC16.82■□□□□ 0.28
SOX1O00570 EIF5AP2-201ENST00000585668 1047 ntBASIC16.82■□□□□ 0.28
SOX1O00570 AL356417.2-202ENST00000608986 532 ntTSL 3 BASIC16.82■□□□□ 0.28
SOX1O00570 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC16.82■□□□□ 0.28
SOX1O00570 AC006453.1-201ENST00000636037 1257 ntBASIC16.82■□□□□ 0.28
SOX1O00570 PRSS30P-206ENST00000641773 873 ntBASIC16.82■□□□□ 0.28
SOX1O00570 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SOX1O00570 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SOX1O00570 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SOX1O00570 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.81■□□□□ 0.28
SOX1O00570 TUBB8P12-201ENST00000308911 1335 ntBASIC16.81■□□□□ 0.28
SOX1O00570 TUBB7P-202ENST00000428444 1305 ntBASIC16.81■□□□□ 0.28
SOX1O00570 TUBB8P7-204ENST00000567960 1332 ntBASIC16.81■□□□□ 0.28
SOX1O00570 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 GATD1-203ENST00000397472 790 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 NPPC-202ENST00000409852 1051 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
SOX1O00570 LINC00028-201ENST00000435497 587 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.81■□□□□ 0.28
SOX1O00570 SLED1-202ENST00000512051 380 ntBASIC16.81■□□□□ 0.28
SOX1O00570 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SOX1O00570 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC16.81■□□□□ 0.28
SOX1O00570 CARHSP1-203ENST00000561530 729 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 47.3 ms