Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 PLLP-204ENST00000569059 665 ntTSL 3 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ANO3-201ENST00000256737 6642 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ATG3-202ENST00000402314 3010 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 GNAS-213ENST00000371099 3709 ntTSL 5 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 MARK1-201ENST00000366917 2946 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 AC026790.1-201ENST00000399760 2941 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 POM121L4P-202ENST00000427789 1891 ntBASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 KRT17P1-201ENST00000399211 1546 ntBASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ANO9-201ENST00000332826 2542 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 TTC30A-201ENST00000355689 5975 ntAPPRIS P1 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 ZBED4-201ENST00000216268 6893 ntAPPRIS P1 TSL 1 (best) BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC8.89□□□□□ -0.99
CHKB-CPT1BH3BT56 SNAP29-201ENST00000215730 4287 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 RAD51D-202ENST00000345365 9988 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TNFSF13-202ENST00000349228 2036 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 GPR107-203ENST00000372410 6991 ntTSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ZBED6CL-201ENST00000343855 2933 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 CARHSP1-218ENST00000614449 2931 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 IRAK4-212ENST00000551736 1684 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 SLC22A2-202ENST00000366953 2597 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 CDHR5-203ENST00000397542 3489 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 KIAA0141-201ENST00000194118 2203 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ATP6V0E2-202ENST00000425642 1649 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 INTS6-201ENST00000311234 3662 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 KCNAB2-206ENST00000378097 4201 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AL391256.1-201ENST00000443260 1855 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AC036111.1-201ENST00000533973 1582 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TREX2-204ENST00000370212 861 ntTSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 SERPINH1P1-201ENST00000419794 1249 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 NDUFB2-207ENST00000465506 1101 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 PBX2P1-201ENST00000493219 1291 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AC069185.1-201ENST00000531395 811 ntTSL 3 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ISCU-212ENST00000547005 795 ntTSL 3 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AF213884.3-201ENST00000563833 479 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AC106739.1-201ENST00000617035 715 ntBASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 PEX1-201ENST00000248633 4385 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 DCST2-202ENST00000368424 2392 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 HIST3H2BB-201ENST00000620438 2364 ntAPPRIS P1 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 SPOCK3-202ENST00000357545 2936 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 REL-201ENST00000295025 11255 ntAPPRIS P3 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 SEC31A-205ENST00000395310 4259 ntAPPRIS P4 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 C5AR1-201ENST00000355085 2311 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 CAMSAP1-201ENST00000312405 6054 ntTSL 1 (best) BASIC8.88□□□□□ -0.99
CHKB-CPT1BH3BT56 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC8.88□□□□□ -0.99
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms