Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 BANF1P1-201ENST00000553684 263 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AL079307.3-201ENST00000556114 283 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AL035252.4-201ENST00000624174 288 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AC124067.4-201ENST00000519691 2379 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 PCDHB19P-201ENST00000570871 2371 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 AC087499.5-201ENST00000452760 1342 ntBASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
NPIPA2E9PIF3 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 COPE-202ENST00000349893 948 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 PIN1P1-201ENST00000412108 996 ntBASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 OBP2A-206ENST00000539850 914 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 NAA38-207ENST00000576861 556 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 AC027307.3-201ENST00000594262 1100 ntBASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 SLC2A6-201ENST00000371897 2301 ntTSL 2 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 NORAD-201ENST00000565493 5339 ntBASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
NPIPA2E9PIF3 TSPAN17-209ENST00000515708 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NPIPA2E9PIF3 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.07
NPIPA2E9PIF3 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 CABP1-204ENST00000453000 1857 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 GPR162-202ENST00000382315 1150 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 METTL26-204ENST00000397665 558 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 CRB3P1-201ENST00000449338 276 ntBASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
NPIPA2E9PIF3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms