Protein–RNA interactions for Protein: A3KN83

SBNO1, Protein strawberry notch homolog 1, humanhuman

Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SBNO1A3KN83 AL450472.2-201ENST00000603663 1156 ntBASIC21.44■■□□□ 1.02
SBNO1A3KN83 LINC01278-203ENST00000608788 820 ntTSL 5 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 LINC01278-207ENST00000610234 555 ntTSL 4 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC21.44■■□□□ 1.02
SBNO1A3KN83 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 LINC00592-202ENST00000640420 768 ntTSL 5 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 CKMT2-201ENST00000254035 1512 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SBNO1A3KN83 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC21.44■■□□□ 1.02
SBNO1A3KN83 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 IRAK1-204ENST00000393687 2049 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 AL691459.1-201ENST00000438589 407 ntTSL 3 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 MTX1P1-201ENST00000440904 838 ntBASIC21.43■■□□□ 1.02
SBNO1A3KN83 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 ACR-203ENST00000529621 708 ntTSL 5 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 AC131235.3-202ENST00000608135 362 ntTSL 5 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 AC005052.1-201ENST00000625181 2492 ntBASIC21.43■■□□□ 1.02
SBNO1A3KN83 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC21.43■■□□□ 1.02
SBNO1A3KN83 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC21.43■■□□□ 1.02
SBNO1A3KN83 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 AHCYP2-201ENST00000430630 1300 ntBASIC21.42■■□□□ 1.02
SBNO1A3KN83 ABHD2-207ENST00000565973 2347 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 MIR663B-201ENST00000408361 115 ntBASIC21.42■■□□□ 1.02
SBNO1A3KN83 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 CHIA-209ENST00000483391 1188 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 RPSAP36-202ENST00000494591 1261 ntBASIC21.42■■□□□ 1.02
SBNO1A3KN83 GAPDHP40-201ENST00000505218 1006 ntBASIC21.42■■□□□ 1.02
SBNO1A3KN83 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 MIR4741-201ENST00000579822 90 ntBASIC21.42■■□□□ 1.02
SBNO1A3KN83 EEF1DP1-201ENST00000585891 896 ntBASIC21.42■■□□□ 1.02
SBNO1A3KN83 YIF1B-215ENST00000592246 936 ntTSL 3 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 PSMC3-209ENST00000530912 1390 ntTSL 5 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 AKTIP-202ENST00000394657 2426 ntAPPRIS P3 TSL 2 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC21.42■■□□□ 1.02
SBNO1A3KN83 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC21.42■■□□□ 1.02
SBNO1A3KN83 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 AC106886.4-201ENST00000623557 2502 ntBASIC21.41■■□□□ 1.02
SBNO1A3KN83 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 AC016723.1-201ENST00000430546 633 ntTSL 3 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC21.41■■□□□ 1.02
SBNO1A3KN83 AC074194.1-201ENST00000505025 622 ntTSL 4 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 CMC2-214ENST00000565925 640 ntTSL 5 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 AP005019.2-201ENST00000615104 511 ntBASIC21.41■■□□□ 1.02
SBNO1A3KN83 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 LINC01002-214ENST00000632102 561 ntTSL 4 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 CCDC142-201ENST00000290418 2835 ntAPPRIS P2 TSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC21.41■■□□□ 1.02
SBNO1A3KN83 KRT9-202ENST00000588431 1493 ntTSL 1 (best) BASIC21.41■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms