Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC012485.3-201ENST00000637634 2424 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC196A0A1B0GTZ2 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 KRT8P37-201ENST00000451609 1420 ntBASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 ADCY1-204ENST00000621543 1647 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC103702.1-201ENST00000548801 2630 ntBASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 EGLN2-207ENST00000593726 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 LINC01121-201ENST00000378479 1095 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 VPS29-207ENST00000549970 818 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 MARCH2-208ENST00000602117 1667 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 GRAMD4P3-201ENST00000621665 1669 ntBASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 TSC2-202ENST00000350773 5532 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 AP005117.1-202ENST00000581724 1908 ntBASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 SLC30A5-202ENST00000396591 4360 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC196A0A1B0GTZ2 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 EFNA4-202ENST00000368409 1263 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 SPDYE17-201ENST00000412399 783 ntBASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 LINC01983-203ENST00000444346 519 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 EHF-205ENST00000527935 557 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC087392.4-201ENST00000574560 486 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 LSM12-202ENST00000585388 942 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 COQ4-205ENST00000609948 956 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 REXO1L1P-202ENST00000608646 1974 ntBASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 ZNF574-202ENST00000359044 2940 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 NPM1-201ENST00000296930 1758 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 LTBR-201ENST00000228918 2260 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 LDOC1-201ENST00000370526 1381 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC196A0A1B0GTZ2 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 USP42-201ENST00000306177 5155 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 SLC4A3-204ENST00000373760 4134 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 RNF186-201ENST00000375121 1250 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC067863.1-201ENST00000494933 530 ntBASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 BRK1-201ENST00000530758 1233 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 AL133215.2-201ENST00000609242 977 ntBASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 Z92544.3-201ENST00000624747 417 ntBASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 KRT18P28-201ENST00000453838 1332 ntBASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 GFOD2-203ENST00000602377 1991 ntTSL 4 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 NFIC-211ENST00000641145 8399 ntBASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC196A0A1B0GTZ2 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC18.65■□□□□ 0.58
CCDC196A0A1B0GTZ2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms