Protein–RNA interactions for Protein: Q9Y5G3

PCDHGB1, Protocadherin gamma-B1, humanhuman

Predictions only

Length 927 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB1Q9Y5G3 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB1Q9Y5G3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
PCDHGB1Q9Y5G3 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
PCDHGB1Q9Y5G3 C20orf166-AS1-203ENST00000475015 2585 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 AC090616.6-203ENST00000579186 1945 ntBASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 GDF2-201ENST00000581492 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 CHFR-204ENST00000443047 2990 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 TP53TG1-202ENST00000416560 710 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 AC104819.1-201ENST00000504587 486 ntBASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 FOSL1P1-201ENST00000511041 816 ntBASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 MIR5100-201ENST00000579544 119 ntBASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 AL589182.2-201ENST00000619332 1049 ntBASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 AL022326.1-202ENST00000641533 845 ntBASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 ATP5F1-202ENST00000369722 3156 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 AC112693.3-201ENST00000624819 1983 ntBASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.8□□□□□ -0.04
PCDHGB1Q9Y5G3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 UBE3A-207ENST00000614096 8741 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 TGOLN2-203ENST00000398263 6138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 ZNF497-201ENST00000311044 3468 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 UBXN11-204ENST00000374217 1846 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 ARHGEF16-203ENST00000378378 3061 ntAPPRIS P1 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 ARPP19-202ENST00000561650 3245 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 AP005117.1-201ENST00000584346 1413 ntBASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 AL139424.1-201ENST00000607572 797 ntBASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 AC005912.2-201ENST00000619492 2400 ntBASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 S1PR2-201ENST00000590320 3582 ntAPPRIS P1 TSL 3 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 TAF1C-216ENST00000566732 2972 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 SMARCA2-203ENST00000349721 5761 ntTSL 5 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 STRA6-207ENST00000535552 2631 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
PCDHGB1Q9Y5G3 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
PCDHGB1Q9Y5G3 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC14.78□□□□□ -0.04
PCDHGB1Q9Y5G3 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
PCDHGB1Q9Y5G3 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms