Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 SS18L2-201ENST00000011691 781 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 RPS5-201ENST00000196551 740 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 AC004987.2-201ENST00000395959 1148 ntBASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 CHCHD2P3-201ENST00000603038 451 ntBASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 TMEM140-201ENST00000275767 1997 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 CYB561D1-201ENST00000310611 5009 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
CTDP1Q9Y5B0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 AC126755.1-201ENST00000525846 6405 ntBASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 GTF2H2C-201ENST00000380729 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 CTRB1-201ENST00000361017 858 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC18.54■□□□□ 0.56
CTDP1Q9Y5B0 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 ETV2-205ENST00000479824 1342 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 TRAF3-204ENST00000539721 1786 ntTSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 RAD18-204ENST00000418463 563 ntTSL 4 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 RAD18-205ENST00000421052 582 ntTSL 3 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 AC245100.5-201ENST00000452108 331 ntBASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 MTUS1-215ENST00000519066 567 ntTSL 4 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 AL691432.1-201ENST00000596308 1422 ntBASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 IER3IP1-202ENST00000639845 832 ntTSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.53■□□□□ 0.56
CTDP1Q9Y5B0 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
CTDP1Q9Y5B0 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 39.5 ms