Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 AL353732.1-201ENST00000569618 1459 ntBASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 HNRNPU-226ENST00000640218 6858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 ATP6V0E2-212ENST00000611515 2565 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
RCL1Q9Y2P8 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 AC091951.1-201ENST00000512854 2465 ntBASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 ISCA1-202ENST00000326094 1264 ntTSL 3 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 TMEM44-201ENST00000330115 1278 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 DAP-202ENST00000432074 1048 ntTSL 2 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 RBSN-204ENST00000449050 903 ntTSL 2 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 KRT17P6-201ENST00000453795 1220 ntBASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 BX005266.1-201ENST00000473402 457 ntBASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 AC087641.1-201ENST00000557561 1021 ntBASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 GZMM-202ENST00000592501 941 ntTSL 3 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 AC066615.1-201ENST00000640911 628 ntBASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
RCL1Q9Y2P8 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 GSN-215ENST00000545652 2428 ntTSL 2 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 AC090616.6-203ENST00000579186 1945 ntBASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 KMT2E-202ENST00000311117 6874 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 PCDHGB1-202ENST00000611598 2592 ntAPPRIS ALT2 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.3
RCL1Q9Y2P8 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 ST6GAL2-204ENST00000409382 7275 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 AUTS2-218ENST00000615871 4511 ntTSL 5 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 PPIH-202ENST00000372549 327 ntTSL 3 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 DPM2-202ENST00000373110 738 ntTSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 HAUS4P1-201ENST00000406739 1145 ntBASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 PRYP5-201ENST00000451909 266 ntBASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 BX276092.5-203ENST00000456199 560 ntBASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 AL136038.3-201ENST00000561909 1096 ntBASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 AL121672.3-201ENST00000608644 468 ntBASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 CDH16-207ENST00000568632 2526 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 U82695.1-201ENST00000635752 1889 ntBASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
RCL1Q9Y2P8 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.1 ms