Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 MYH11-201ENST00000300036 6029 ntAPPRIS P3 TSL 1 (best) BASIC15.37■□□□□ 0.05
LRCH1Q9Y2L9 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC15.37■□□□□ 0.05
LRCH1Q9Y2L9 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 SYT9-201ENST00000318881 3955 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 AFAP1L1-205ENST00000515000 2319 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 AL645929.1-201ENST00000420084 975 ntBASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 RAPGEF4-201ENST00000397081 4299 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 MBLAC2-202ENST00000514906 1936 ntBASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC15.36■□□□□ 0.05
LRCH1Q9Y2L9 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 ING1-203ENST00000375774 2870 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 AC092127.1-201ENST00000567093 3455 ntBASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 CD1E-210ENST00000368165 1003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 COPS8-203ENST00000409334 794 ntTSL 5 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 HLA-F-220ENST00000434407 884 ntBASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 AC092597.1-201ENST00000487352 616 ntBASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 GFOD2-207ENST00000602855 819 ntTSL 3 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 SPEG-225ENST00000617028 815 ntTSL 5 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 VPS72-207ENST00000640458 689 ntTSL 5 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 APP-205ENST00000358918 2366 ntTSL 5 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
LRCH1Q9Y2L9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 C21orf58-202ENST00000397679 2900 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 CICP17-201ENST00000418553 2377 ntBASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 LINC01230-201ENST00000625222 3017 ntBASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 PDZD7-203ENST00000470414 1057 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 AC069148.1-201ENST00000608741 768 ntBASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.34■□□□□ 0.05
LRCH1Q9Y2L9 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 48.7 ms